Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC090517.3-201ENST00000625170 141 ntBASIC2.23□□□□□ -2.05
SNX3O60493 MTND4P1-201ENST00000457501 1466 ntBASIC2.22□□□□□ -2.05
SNX3O60493 snoU2_19.1-201ENST00000362361 80 ntBASIC2.22□□□□□ -2.05
SNX3O60493 Y_RNA.248-201ENST00000364501 109 ntBASIC2.22□□□□□ -2.05
SNX3O60493 RNU6-1141P-201ENST00000364520 107 ntBASIC2.22□□□□□ -2.05
SNX3O60493 RNU6-1317P-201ENST00000364582 104 ntBASIC2.22□□□□□ -2.05
SNX3O60493 RNU6-128P-201ENST00000383976 107 ntBASIC2.22□□□□□ -2.05
SNX3O60493 SNORA44-201ENST00000384584 132 ntBASIC2.22□□□□□ -2.05
SNX3O60493 MIR95-201ENST00000385072 81 ntBASIC2.22□□□□□ -2.05
SNX3O60493 AC009161.1-201ENST00000417306 376 ntBASIC2.22□□□□□ -2.05
SNX3O60493 RPL30P16-201ENST00000419341 429 ntBASIC2.22□□□□□ -2.05
SNX3O60493 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
SNX3O60493 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.22□□□□□ -2.05
SNX3O60493 CYP2C59P-201ENST00000457790 269 ntBASIC2.22□□□□□ -2.05
SNX3O60493 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.22□□□□□ -2.05
SNX3O60493 RPL9P9-202ENST00000466501 579 ntBASIC2.22□□□□□ -2.05
SNX3O60493 TRBVA-201ENST00000498804 316 ntBASIC2.22□□□□□ -2.05
SNX3O60493 RNU6-612P-201ENST00000516909 102 ntBASIC2.22□□□□□ -2.05
SNX3O60493 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.22□□□□□ -2.05
SNX3O60493 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.22□□□□□ -2.05
SNX3O60493 SCOCP1-201ENST00000554676 349 ntBASIC2.22□□□□□ -2.05
SNX3O60493 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
SNX3O60493 MIR3942-201ENST00000585264 109 ntBASIC2.22□□□□□ -2.05
SNX3O60493 AL160281.1-201ENST00000605307 311 ntBASIC2.22□□□□□ -2.05
SNX3O60493 AC103810.6-201ENST00000606708 136 ntBASIC2.22□□□□□ -2.05
SNX3O60493 AL136221.1-201ENST00000621449 509 ntBASIC2.22□□□□□ -2.05
SNX3O60493 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNX3O60493 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
SNX3O60493 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SNX3O60493 Y_RNA.86-201ENST00000363020 111 ntBASIC2.21□□□□□ -2.06
SNX3O60493 SNORA38-201ENST00000363946 132 ntBASIC2.21□□□□□ -2.06
SNX3O60493 SNORA32.2-201ENST00000384049 122 ntBASIC2.21□□□□□ -2.06
SNX3O60493 RNU4-52P-201ENST00000384209 138 ntBASIC2.21□□□□□ -2.06
SNX3O60493 AL591034.2-201ENST00000402839 359 ntBASIC2.21□□□□□ -2.06
SNX3O60493 RNU6-325P-201ENST00000411132 105 ntBASIC2.21□□□□□ -2.06
SNX3O60493 AP000275.1-201ENST00000411943 390 ntBASIC2.21□□□□□ -2.06
SNX3O60493 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.21□□□□□ -2.06
SNX3O60493 RPL23AP95-201ENST00000426806 265 ntBASIC2.21□□□□□ -2.06
SNX3O60493 AL139415.2-201ENST00000431968 163 ntBASIC2.21□□□□□ -2.06
SNX3O60493 RPL32P28-201ENST00000443577 397 ntBASIC2.21□□□□□ -2.06
SNX3O60493 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.21□□□□□ -2.06
SNX3O60493 AL021397.1-201ENST00000451806 248 ntBASIC2.21□□□□□ -2.06
SNX3O60493 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.21□□□□□ -2.06
SNX3O60493 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.21□□□□□ -2.06
SNX3O60493 AC025465.4-201ENST00000513422 638 ntBASIC2.21□□□□□ -2.06
SNX3O60493 RNU6-586P-201ENST00000517265 104 ntBASIC2.21□□□□□ -2.06
SNX3O60493 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.21□□□□□ -2.06
SNX3O60493 AF235103.2-201ENST00000525753 346 ntBASIC2.21□□□□□ -2.06
SNX3O60493 AC115990.1-201ENST00000526957 301 ntBASIC2.21□□□□□ -2.06
SNX3O60493 HSPE1P4-201ENST00000550617 308 ntBASIC2.21□□□□□ -2.06
SNX3O60493 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.21□□□□□ -2.06
SNX3O60493 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.21□□□□□ -2.06
SNX3O60493 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.21□□□□□ -2.06
SNX3O60493 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.21□□□□□ -2.06
SNX3O60493 AL138726.1-201ENST00000614873 333 ntBASIC2.21□□□□□ -2.06
SNX3O60493 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.2□□□□□ -2.06
SNX3O60493 RNU1-23P-201ENST00000363361 144 ntBASIC2.2□□□□□ -2.06
SNX3O60493 RNA5SP240-201ENST00000365355 128 ntBASIC2.2□□□□□ -2.06
SNX3O60493 RNU6-831P-201ENST00000384548 107 ntBASIC2.2□□□□□ -2.06
SNX3O60493 RNU6-1274P-201ENST00000384557 107 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AL030996.1-201ENST00000411430 235 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
SNX3O60493 AL590632.1-201ENST00000424289 371 ntBASIC2.2□□□□□ -2.06
SNX3O60493 MTND3P9-201ENST00000429526 346 ntBASIC2.2□□□□□ -2.06
SNX3O60493 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.2□□□□□ -2.06
SNX3O60493 USP9YP28-201ENST00000435142 589 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC244670.1-201ENST00000436879 112 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.2□□□□□ -2.06
SNX3O60493 RNU7-187P-201ENST00000458985 68 ntBASIC2.2□□□□□ -2.06
SNX3O60493 RPS29P27-201ENST00000463711 170 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
SNX3O60493 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.2□□□□□ -2.06
SNX3O60493 HMGB1P35-201ENST00000503360 598 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC096745.1-201ENST00000509945 370 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.2□□□□□ -2.06
SNX3O60493 RNU6-358P-201ENST00000516564 75 ntBASIC2.2□□□□□ -2.06
SNX3O60493 SNORA31.16-201ENST00000516773 139 ntBASIC2.2□□□□□ -2.06
SNX3O60493 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.2□□□□□ -2.06
SNX3O60493 AP005902.1-201ENST00000521358 186 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC107953.1-201ENST00000522216 297 ntBASIC2.2□□□□□ -2.06
SNX3O60493 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC018638.8-201ENST00000588755 281 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.2□□□□□ -2.06
SNX3O60493 AL670379.2-201ENST00000604983 252 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AL356157.2-201ENST00000605122 111 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC008121.3-201ENST00000618726 433 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC009033.1-201ENST00000624279 431 ntBASIC2.2□□□□□ -2.06
SNX3O60493 SNORD98-201ENST00000636377 67 ntBASIC2.2□□□□□ -2.06
SNX3O60493 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.2□□□□□ -2.06
SNX3O60493 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.2□□□□□ -2.06
SNX3O60493 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNX3O60493 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNX3O60493 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.2□□□□□ -2.06
SNX3O60493 RNU6-95P-201ENST00000384697 107 ntBASIC2.19□□□□□ -2.06
SNX3O60493 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNX3O60493 SNORA11-201ENST00000408789 128 ntBASIC2.19□□□□□ -2.06
SNX3O60493 RN7SKP61-201ENST00000410642 295 ntBASIC2.19□□□□□ -2.06
SNX3O60493 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX3O60493 AC078809.1-201ENST00000427601 140 ntBASIC2.19□□□□□ -2.06
SNX3O60493 AL133396.1-201ENST00000432048 687 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms