Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 GAPDHP17-201ENST00000449858 1001 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.5□□□□□ -2.17
CHMP2AO43633 AC116562.3-201ENST00000506136 177 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 AC104806.1-201ENST00000508720 308 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.5□□□□□ -2.17
CHMP2AO43633 AC093259.1-201ENST00000509755 300 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 SNORA44.1-201ENST00000517031 108 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 COPS8P3-201ENST00000526024 482 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.5□□□□□ -2.17
CHMP2AO43633 AC068587.5-201ENST00000528506 175 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.5□□□□□ -2.17
CHMP2AO43633 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.5□□□□□ -2.17
CHMP2AO43633 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.5□□□□□ -2.17
CHMP2AO43633 BNIP3P8-201ENST00000597863 560 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.5□□□□□ -2.17
CHMP2AO43633 MIR1248-201ENST00000629190 106 ntBASIC1.5□□□□□ -2.17
CHMP2AO43633 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CHMP2AO43633 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHMP2AO43633 RNU6-78P-201ENST00000362897 107 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 RNU6-282P-201ENST00000365357 103 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.49□□□□□ -2.17
CHMP2AO43633 USP9YP18-201ENST00000425912 695 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AC137499.1-201ENST00000427602 88 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 MTND5P25-201ENST00000430499 799 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.49□□□□□ -2.17
CHMP2AO43633 AC073614.1-201ENST00000438690 650 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AL031667.1-201ENST00000440222 725 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 SNRPFP4-201ENST00000456366 242 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AL122001.1-201ENST00000457027 370 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.49□□□□□ -2.17
CHMP2AO43633 RNU6-685P-201ENST00000517088 95 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 RN7SKP256-201ENST00000517201 314 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.49□□□□□ -2.17
CHMP2AO43633 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.49□□□□□ -2.17
CHMP2AO43633 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.49□□□□□ -2.17
CHMP2AO43633 AC010900.2-201ENST00000604508 210 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AP001485.1-201ENST00000604799 199 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 Z99289.3-201ENST00000605586 594 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AC122133.1-201ENST00000613964 233 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 U6.42-201ENST00000618440 107 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 RMST_7.1-201ENST00000621935 268 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AC011155.2-201ENST00000623202 216 ntBASIC1.49□□□□□ -2.17
CHMP2AO43633 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHMP2AO43633 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 RNU6-179P-201ENST00000363350 107 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 Y_RNA.169-201ENST00000363745 96 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 SNORA48.1-201ENST00000390879 135 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 SNORA40.3-201ENST00000390964 122 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 SNORA26.8-201ENST00000391306 124 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 Y_RNA.597-201ENST00000410463 100 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.48□□□□□ -2.17
CHMP2AO43633 BX295541.1-201ENST00000417774 250 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 MTND2P18-201ENST00000419962 1030 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 MTCYBP5-201ENST00000423752 1135 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 VN1R108P-201ENST00000431580 830 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.48□□□□□ -2.17
CHMP2AO43633 AC009961.2-201ENST00000435771 251 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.48□□□□□ -2.17
CHMP2AO43633 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.48□□□□□ -2.17
CHMP2AO43633 NDUFB1P2-201ENST00000449477 176 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.48□□□□□ -2.17
CHMP2AO43633 AC114801.2-201ENST00000503825 781 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.48□□□□□ -2.17
CHMP2AO43633 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 LRRC34P1-201ENST00000542742 915 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 Z84480.1-201ENST00000605131 311 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 AC123912.5-201ENST00000605470 343 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 AC026585.1-201ENST00000619582 524 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
CHMP2AO43633 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.48□□□□□ -2.17
CHMP2AO43633 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CHMP2AO43633 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.48□□□□□ -2.17
CHMP2AO43633 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.47□□□□□ -2.17
CHMP2AO43633 RNU6-74P-201ENST00000384235 107 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 MT-TH-201ENST00000387441 69 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 RNU6-550P-201ENST00000391057 101 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.47□□□□□ -2.17
CHMP2AO43633 HMGN1P14-201ENST00000412459 517 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.47□□□□□ -2.17
CHMP2AO43633 MTCO2P34-201ENST00000421994 607 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 RPS29P15-201ENST00000458329 171 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 FO393415.2-201ENST00000480085 343 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 MTCYBP40-201ENST00000509390 1135 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.47□□□□□ -2.17
CHMP2AO43633 AC009646.1-201ENST00000510455 318 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 MIR449C-201ENST00000516047 92 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 Vault.3-201ENST00000516676 95 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 MIR3913-1-201ENST00000577744 102 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 AC098848.2-201ENST00000588023 330 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 AL359821.1-201ENST00000605519 182 ntBASIC1.47□□□□□ -2.17
CHMP2AO43633 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
CHMP2AO43633 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
CHMP2AO43633 ZNF680P1-201ENST00000436625 1469 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-37P-201ENST00000362692 107 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms