Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MTND1P30-201ENST00000441241 901 ntBASIC1.03□□□□□ -2.24
SGCEO43556 ART2BP-201ENST00000453501 499 ntBASIC1.03□□□□□ -2.24
SGCEO43556 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.03□□□□□ -2.24
SGCEO43556 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
SGCEO43556 AC087883.1-201ENST00000551882 391 ntBASIC1.03□□□□□ -2.24
SGCEO43556 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.03□□□□□ -2.24
SGCEO43556 ZNF519P3-201ENST00000557158 1032 ntBASIC1.03□□□□□ -2.24
SGCEO43556 AL359999.1-201ENST00000604513 294 ntBASIC1.03□□□□□ -2.24
SGCEO43556 AC105148.1-201ENST00000604961 409 ntBASIC1.03□□□□□ -2.24
SGCEO43556 SNORD98-201ENST00000636377 67 ntBASIC1.03□□□□□ -2.24
SGCEO43556 RNU4-56P-201ENST00000364700 142 ntBASIC1.02□□□□□ -2.25
SGCEO43556 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
SGCEO43556 RNU6-1242P-201ENST00000391052 103 ntBASIC1.02□□□□□ -2.25
SGCEO43556 MRPL35P1-201ENST00000404272 572 ntBASIC1.02□□□□□ -2.25
SGCEO43556 EEF1A1P40-201ENST00000412883 573 ntBASIC1.02□□□□□ -2.25
SGCEO43556 AC004965.1-201ENST00000413033 213 ntBASIC1.02□□□□□ -2.25
SGCEO43556 MED13P1-201ENST00000428342 171 ntBASIC1.02□□□□□ -2.25
SGCEO43556 MTND5P25-201ENST00000430499 799 ntBASIC1.02□□□□□ -2.25
SGCEO43556 RPS24P1-201ENST00000438550 371 ntBASIC1.02□□□□□ -2.25
SGCEO43556 AL022238.1-201ENST00000442557 355 ntBASIC1.02□□□□□ -2.25
SGCEO43556 SNRPEP8-201ENST00000442866 260 ntBASIC1.02□□□□□ -2.25
SGCEO43556 OR2AQ1P-201ENST00000451972 200 ntBASIC1.02□□□□□ -2.25
SGCEO43556 RPL31P3-201ENST00000458430 332 ntBASIC1.02□□□□□ -2.25
SGCEO43556 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.02□□□□□ -2.25
SGCEO43556 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.02□□□□□ -2.25
SGCEO43556 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.02□□□□□ -2.25
SGCEO43556 RNU5A-4P-201ENST00000516588 111 ntBASIC1.02□□□□□ -2.25
SGCEO43556 AC019176.1-201ENST00000518519 225 ntBASIC1.02□□□□□ -2.25
SGCEO43556 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.02□□□□□ -2.25
SGCEO43556 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.02□□□□□ -2.25
SGCEO43556 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.02□□□□□ -2.25
SGCEO43556 AC090115.3-201ENST00000553218 849 ntBASIC1.02□□□□□ -2.25
SGCEO43556 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.02□□□□□ -2.25
SGCEO43556 MIR4769-201ENST00000584126 77 ntBASIC1.02□□□□□ -2.25
SGCEO43556 AC008521.1-201ENST00000587471 187 ntBASIC1.02□□□□□ -2.25
SGCEO43556 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.02□□□□□ -2.25
SGCEO43556 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SGCEO43556 AL391987.6-201ENST00000305671 199 ntBASIC1.01□□□□□ -2.25
SGCEO43556 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SGCEO43556 MIR340-201ENST00000362125 95 ntBASIC1.01□□□□□ -2.25
SGCEO43556 RNU6-1019P-201ENST00000364424 107 ntBASIC1.01□□□□□ -2.25
SGCEO43556 MIR558-201ENST00000384920 94 ntBASIC1.01□□□□□ -2.25
SGCEO43556 MRPL42P2-201ENST00000403169 426 ntBASIC1.01□□□□□ -2.25
SGCEO43556 RNU6-387P-201ENST00000411331 105 ntBASIC1.01□□□□□ -2.25
SGCEO43556 AL161935.2-201ENST00000414627 60 ntBASIC1.01□□□□□ -2.25
SGCEO43556 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
SGCEO43556 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.01□□□□□ -2.25
SGCEO43556 RPS6P15-201ENST00000431996 751 ntBASIC1.01□□□□□ -2.25
SGCEO43556 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.01□□□□□ -2.25
SGCEO43556 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.01□□□□□ -2.25
SGCEO43556 AL049829.1-201ENST00000465411 156 ntBASIC1.01□□□□□ -2.25
SGCEO43556 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.01□□□□□ -2.25
SGCEO43556 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.01□□□□□ -2.25
SGCEO43556 AL133373.1-201ENST00000497098 94 ntBASIC1.01□□□□□ -2.25
SGCEO43556 AC010587.1-201ENST00000505809 469 ntBASIC1.01□□□□□ -2.25
SGCEO43556 RNA5SP458-201ENST00000516188 119 ntBASIC1.01□□□□□ -2.25
SGCEO43556 MIR4509-3-201ENST00000578671 94 ntBASIC1.01□□□□□ -2.25
SGCEO43556 MIR4509-2-201ENST00000583920 94 ntBASIC1.01□□□□□ -2.25
SGCEO43556 RNU6-87P-201ENST00000607561 108 ntBASIC1.01□□□□□ -2.25
SGCEO43556 AL157392.4-201ENST00000609756 345 ntBASIC1.01□□□□□ -2.25
SGCEO43556 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
SGCEO43556 MIR4509-1-201ENST00000618224 94 ntBASIC1.01□□□□□ -2.25
SGCEO43556 MIR8065-201ENST00000620577 100 ntBASIC1.01□□□□□ -2.25
SGCEO43556 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1□□□□□ -2.25
SGCEO43556 RNA5SP327-201ENST00000362494 101 ntBASIC1□□□□□ -2.25
SGCEO43556 RNU6-105P-201ENST00000363909 104 ntBASIC1□□□□□ -2.25
SGCEO43556 RNU6-1141P-201ENST00000364520 107 ntBASIC1□□□□□ -2.25
SGCEO43556 RNU6-641P-201ENST00000384006 107 ntBASIC1□□□□□ -2.25
SGCEO43556 RPL23AP32-201ENST00000395315 459 ntBASIC1□□□□□ -2.25
SGCEO43556 MTCYBP2-201ENST00000407745 171 ntBASIC1□□□□□ -2.25
SGCEO43556 MTCO1P21-201ENST00000416634 589 ntBASIC1□□□□□ -2.25
SGCEO43556 AL163195.1-201ENST00000496941 348 ntBASIC1□□□□□ -2.25
SGCEO43556 RBBP4P6-201ENST00000508098 202 ntBASIC1□□□□□ -2.25
SGCEO43556 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1□□□□□ -2.25
SGCEO43556 RNU7-40P-201ENST00000516397 64 ntBASIC1□□□□□ -2.25
SGCEO43556 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1□□□□□ -2.25
SGCEO43556 AC109446.1-201ENST00000566172 220 ntBASIC1□□□□□ -2.25
SGCEO43556 AC015688.6-201ENST00000577737 104 ntBASIC1□□□□□ -2.25
SGCEO43556 AC008752.3-201ENST00000588113 712 ntBASIC1□□□□□ -2.25
SGCEO43556 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
SGCEO43556 AC104073.3-201ENST00000610942 955 ntBASIC1□□□□□ -2.25
SGCEO43556 AL607023.1-201ENST00000620045 248 ntBASIC1□□□□□ -2.25
SGCEO43556 AL031667.3-201ENST00000620124 655 ntBASIC1□□□□□ -2.25
SGCEO43556 AL049777.1-201ENST00000622740 518 ntBASIC1□□□□□ -2.25
SGCEO43556 AC097372.5-201ENST00000623665 376 ntBASIC1□□□□□ -2.25
SGCEO43556 AL359757.2-201ENST00000624309 274 ntBASIC1□□□□□ -2.25
SGCEO43556 AC095038.3-201ENST00000634439 195 ntBASIC1□□□□□ -2.25
SGCEO43556 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1□□□□□ -2.25
SGCEO43556 AL159152.1-201ENST00000635019 2587 ntBASIC0.99□□□□□ -2.25
SGCEO43556 RNU6-39P-201ENST00000384344 107 ntBASIC0.99□□□□□ -2.25
SGCEO43556 RNU6-607P-201ENST00000411283 108 ntBASIC0.99□□□□□ -2.25
SGCEO43556 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.99□□□□□ -2.25
SGCEO43556 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.99□□□□□ -2.25
SGCEO43556 AC069257.2-201ENST00000441819 155 ntBASIC0.99□□□□□ -2.25
SGCEO43556 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.99□□□□□ -2.25
SGCEO43556 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.99□□□□□ -2.25
SGCEO43556 ATP5J2P3-201ENST00000451550 258 ntBASIC0.99□□□□□ -2.25
SGCEO43556 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.99□□□□□ -2.25
SGCEO43556 AC093852.1-201ENST00000503587 266 ntBASIC0.99□□□□□ -2.25
SGCEO43556 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms