Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC025754.2-201ENST00000606491 432 ntBASIC1.44□□□□□ -2.18
LSM1O15116 AL603839.4-201ENST00000624658 1005 ntBASIC1.44□□□□□ -2.18
LSM1O15116 SNORD98-201ENST00000636377 67 ntBASIC1.44□□□□□ -2.18
LSM1O15116 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.44□□□□□ -2.18
LSM1O15116 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LSM1O15116 RNU6-1141P-201ENST00000364520 107 ntBASIC1.43□□□□□ -2.18
LSM1O15116 RNU6-715P-201ENST00000365204 103 ntBASIC1.43□□□□□ -2.18
LSM1O15116 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LSM1O15116 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.43□□□□□ -2.18
LSM1O15116 RNU6-26P-201ENST00000383985 107 ntBASIC1.43□□□□□ -2.18
LSM1O15116 RNU6-116P-201ENST00000384042 109 ntBASIC1.43□□□□□ -2.18
LSM1O15116 RNU6-43P-201ENST00000384302 107 ntBASIC1.43□□□□□ -2.18
LSM1O15116 SNORA26.3-201ENST00000391119 136 ntBASIC1.43□□□□□ -2.18
LSM1O15116 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
LSM1O15116 RNA5SP201-201ENST00000410316 124 ntBASIC1.43□□□□□ -2.18
LSM1O15116 AC123900.1-201ENST00000420390 96 ntBASIC1.43□□□□□ -2.18
LSM1O15116 NCOR1P3-201ENST00000420479 303 ntBASIC1.43□□□□□ -2.18
LSM1O15116 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.43□□□□□ -2.18
LSM1O15116 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.43□□□□□ -2.18
LSM1O15116 AC009961.2-201ENST00000435771 251 ntBASIC1.43□□□□□ -2.18
LSM1O15116 AC079448.1-201ENST00000449377 373 ntBASIC1.43□□□□□ -2.18
LSM1O15116 MTCO2P6-201ENST00000463134 685 ntBASIC1.43□□□□□ -2.18
LSM1O15116 YWHAEP4-201ENST00000505390 198 ntBASIC1.43□□□□□ -2.18
LSM1O15116 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.43□□□□□ -2.18
LSM1O15116 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LSM1O15116 SNORA77B-201ENST00000578179 125 ntBASIC1.43□□□□□ -2.18
LSM1O15116 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.43□□□□□ -2.18
LSM1O15116 MIR4775-201ENST00000581168 75 ntBASIC1.43□□□□□ -2.18
LSM1O15116 AC011458.1-201ENST00000604034 617 ntBASIC1.43□□□□□ -2.18
LSM1O15116 AC068205.3-201ENST00000636385 468 ntBASIC1.43□□□□□ -2.18
LSM1O15116 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LSM1O15116 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
LSM1O15116 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-37P-201ENST00000362692 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 Y_RNA.67-201ENST00000362870 100 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-11P-201ENST00000364234 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 SNORD32A-201ENST00000364805 84 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-336P-201ENST00000364891 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-25P-201ENST00000383873 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-1-201ENST00000383898 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-48P-201ENST00000384161 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-36P-201ENST00000384172 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-4P-201ENST00000384205 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-5P-201ENST00000384238 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-3P-201ENST00000384314 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-16P-201ENST00000384385 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-692P-201ENST00000384496 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-15P-201ENST00000384534 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-2-201ENST00000384627 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-29P-201ENST00000384637 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-9-201ENST00000384776 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-33P-201ENST00000384793 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 MIR517C-201ENST00000385103 95 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RPS29P13-201ENST00000402041 169 ntBASIC1.42□□□□□ -2.18
LSM1O15116 MTND3P17-201ENST00000416968 344 ntBASIC1.42□□□□□ -2.18
LSM1O15116 CYCSP49-201ENST00000420810 319 ntBASIC1.42□□□□□ -2.18
LSM1O15116 AC010095.1-201ENST00000443543 144 ntBASIC1.42□□□□□ -2.18
LSM1O15116 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.42□□□□□ -2.18
LSM1O15116 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.42□□□□□ -2.18
LSM1O15116 AC025465.3-201ENST00000510570 311 ntBASIC1.42□□□□□ -2.18
LSM1O15116 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.42□□□□□ -2.18
LSM1O15116 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
LSM1O15116 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.42□□□□□ -2.18
LSM1O15116 AC123912.5-201ENST00000605470 343 ntBASIC1.42□□□□□ -2.18
LSM1O15116 RNU6-6P-201ENST00000606623 107 ntBASIC1.42□□□□□ -2.18
LSM1O15116 AL133173.2-201ENST00000614270 90 ntBASIC1.42□□□□□ -2.18
LSM1O15116 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LSM1O15116 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.42□□□□□ -2.18
LSM1O15116 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LSM1O15116 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.42□□□□□ -2.18
LSM1O15116 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
LSM1O15116 U3.4-201ENST00000363352 213 ntBASIC1.41□□□□□ -2.18
LSM1O15116 RNU6-1303P-201ENST00000364841 107 ntBASIC1.41□□□□□ -2.18
LSM1O15116 MIR454-201ENST00000390180 115 ntBASIC1.41□□□□□ -2.18
LSM1O15116 MIR1261-201ENST00000408659 82 ntBASIC1.41□□□□□ -2.18
LSM1O15116 RN7SKP61-201ENST00000410642 295 ntBASIC1.41□□□□□ -2.18
LSM1O15116 RPS3AP3-201ENST00000411933 242 ntBASIC1.41□□□□□ -2.18
LSM1O15116 AC007098.1-201ENST00000420122 367 ntBASIC1.41□□□□□ -2.18
LSM1O15116 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.41□□□□□ -2.18
LSM1O15116 AC005741.1-201ENST00000511094 432 ntBASIC1.41□□□□□ -2.18
LSM1O15116 RNU6-377P-201ENST00000515965 102 ntBASIC1.41□□□□□ -2.18
LSM1O15116 SNORA3.4-201ENST00000515969 96 ntBASIC1.41□□□□□ -2.18
LSM1O15116 RNU6-410P-201ENST00000517006 107 ntBASIC1.41□□□□□ -2.18
LSM1O15116 AC109479.2-201ENST00000517842 174 ntBASIC1.41□□□□□ -2.18
LSM1O15116 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.41□□□□□ -2.18
LSM1O15116 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
LSM1O15116 AC092354.1-201ENST00000606057 376 ntBASIC1.41□□□□□ -2.18
LSM1O15116 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LSM1O15116 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LSM1O15116 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LSM1O15116 SNORA67.5-201ENST00000391036 107 ntBASIC1.4□□□□□ -2.19
LSM1O15116 RNU6-293P-201ENST00000411259 106 ntBASIC1.4□□□□□ -2.19
LSM1O15116 RPL30P13-201ENST00000418873 348 ntBASIC1.4□□□□□ -2.19
LSM1O15116 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.4□□□□□ -2.19
LSM1O15116 RPL23AP95-201ENST00000426806 265 ntBASIC1.4□□□□□ -2.19
LSM1O15116 AC010975.2-201ENST00000427781 588 ntBASIC1.4□□□□□ -2.19
LSM1O15116 C8orf59P1-201ENST00000429930 303 ntBASIC1.4□□□□□ -2.19
LSM1O15116 AC079781.2-201ENST00000446424 169 ntBASIC1.4□□□□□ -2.19
LSM1O15116 SNRPFP4-201ENST00000456366 242 ntBASIC1.4□□□□□ -2.19
LSM1O15116 AL162395.1-201ENST00000457882 422 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms