Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SNORA3A-201ENST00000364113 130 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-1322P-201ENST00000364309 107 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNA5SP190-201ENST00000365222 118 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-393P-201ENST00000384475 107 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 MTCO1P21-201ENST00000416634 589 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 PGBD4P6-201ENST00000421501 610 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC108667.1-201ENST00000428618 249 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 MICF-203ENST00000432679 129 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AP001025.1-201ENST00000486139 332 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 MTAPP1-201ENST00000489154 819 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 LRRC34P2-201ENST00000514850 553 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.687-201ENST00000516558 91 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.704-201ENST00000516851 102 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 BNIP3P6-201ENST00000549284 499 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC090115.3-201ENST00000553218 849 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC008749.1-201ENST00000597650 306 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL355877.2-201ENST00000603670 358 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR502-201ENST00000606349 86 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC004492.1-201ENST00000607036 742 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL161423.1-201ENST00000613700 262 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC090517.2-201ENST00000614966 680 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC073534.2-201ENST00000620377 381 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC022418.1-201ENST00000624118 445 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 Z69720.2-201ENST00000624755 279 ntBASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.77□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC004520.1-201ENST00000608362 1413 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU1-72P-201ENST00000362976 153 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-1085P-201ENST00000363576 107 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-1280P-201ENST00000365211 107 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR514A2-201ENST00000385131 88 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR514A3-201ENST00000385132 88 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 PTGES3P4-201ENST00000426243 356 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 BTF3P15-201ENST00000455606 336 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 RN7SKP210-201ENST00000459176 261 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 MTCYBP40-201ENST00000509390 1135 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC074344.1-201ENST00000512823 224 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNA5SP401-201ENST00000515920 127 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-250P-201ENST00000516958 103 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 SNORA31.23-201ENST00000517219 133 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 CR383656.8-201ENST00000549046 145 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR5692A1-201ENST00000580523 69 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC123912.5-201ENST00000605470 343 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 SNORD14A-201ENST00000606526 91 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 snoU13.31-201ENST00000607291 104 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 U6.42-201ENST00000618440 107 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR1321-201ENST00000637766 79 ntBASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TMX2-CTNND1H3BSU7 MTND4P14-201ENST00000435799 1354 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.38-201ENST00000362617 102 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-1090P-201ENST00000364065 94 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-522P-201ENST00000364497 107 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.324-201ENST00000365165 102 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-19P-201ENST00000384718 107 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR181A1-201ENST00000385026 110 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-1068P-201ENST00000410958 103 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 PRPS1P1-201ENST00000445305 876 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 SNRPFP3-201ENST00000457792 225 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AP001324.2-201ENST00000461163 319 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 DYNLL1P5-201ENST00000467158 270 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 RPS29P25-201ENST00000481709 171 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC011352.1-201ENST00000512300 793 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU5B-3P-201ENST00000516601 115 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 SNORA43.2-201ENST00000516652 128 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AP005902.1-201ENST00000521358 186 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL512360.1-201ENST00000555346 234 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC090897.2-201ENST00000581715 130 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms