Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 BNIP3P16-201ENST00000589779 534 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AC120349.3-201ENST00000624377 529 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AC068205.3-201ENST00000636385 468 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 MTND5P17-201ENST00000418405 1603 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 RNU5E-5P-201ENST00000365379 116 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 RNU6-45P-201ENST00000384471 107 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 MIR150-201ENST00000385048 84 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 MIR1323-201ENST00000408090 73 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 MTATP6P19-201ENST00000413797 659 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AC139712.2-201ENST00000424302 339 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AL513185.2-201ENST00000425543 193 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 JTBP1-201ENST00000441314 247 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 SNRPGP13-201ENST00000442212 177 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 USP9YP12-201ENST00000450481 570 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 RPS26P55-201ENST00000471178 356 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 RPL26P26-201ENST00000480251 434 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AC097473.1-201ENST00000508142 408 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 RNU6-237P-201ENST00000515985 71 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AP001893.2-201ENST00000526949 202 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AC087883.1-201ENST00000551882 391 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 RPL21P5-201ENST00000554662 472 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 SUB1P3-201ENST00000564581 315 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 MIR5094-201ENST00000578766 85 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 MIR4255-201ENST00000579351 72 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AP001485.1-201ENST00000604799 199 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AC091304.9-201ENST00000612091 226 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AC027807.2-201ENST00000616099 408 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AC009159.2-201ENST00000617603 606 ntBASIC1.1□□□□□ -2.23
RBFOX3A6NFN3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 U8.1-201ENST00000362843 134 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 SNORD115-7-201ENST00000365306 82 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 SNORA20.2-201ENST00000383922 131 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 RNU6-43P-201ENST00000384302 107 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 MIR517C-201ENST00000385103 95 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 AL356583.2-201ENST00000426536 280 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 C8orf59P1-201ENST00000429930 303 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 RPS27AP8-201ENST00000452665 445 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 SNORD13-201ENST00000459299 104 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 RAP1BP2-201ENST00000478270 544 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 MTND3P3-201ENST00000505004 126 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 HMGN1P13-201ENST00000505795 138 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 RNA5SP458-201ENST00000516188 119 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 SNORD60.2-201ENST00000516883 86 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 RNU6-1220P-201ENST00000517126 108 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 AC109479.2-201ENST00000517842 174 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 SUMO2P18-201ENST00000518873 252 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 VN1R107P-201ENST00000601784 209 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 AL078595.3-201ENST00000623815 1166 ntBASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.09□□□□□ -2.23
RBFOX3A6NFN3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.09□□□□□ -2.24
RBFOX3A6NFN3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 RNU6-169P-201ENST00000365336 107 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 RNU6-360P-201ENST00000390944 104 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 RNA5SP201-201ENST00000410316 124 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 RNU2-41P-201ENST00000410991 178 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 MTCO3P41-201ENST00000414801 328 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 RPL21P111-201ENST00000418453 477 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 TAF9P1-201ENST00000445421 515 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 TAF9P2-201ENST00000454958 515 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 RNU6-377P-201ENST00000515965 102 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AP003461.1-201ENST00000528866 78 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AC023050.3-201ENST00000541142 333 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 ELOCP32-201ENST00000548625 324 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AC005668.1-201ENST00000571142 476 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 MIR3683-201ENST00000580847 82 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AC005771.1-201ENST00000585581 349 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AC110760.3-201ENST00000598794 467 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 AC005014.3-201ENST00000605985 190 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.08□□□□□ -2.24
RBFOX3A6NFN3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms