Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL133216.2-202ENST00000634512 349 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 MIR6866-201ENST00000638146 69 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AC008163.1-202ENST00000636004 2889 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-511P-201ENST00000363496 107 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 SNORD114-24-201ENST00000365029 72 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 SNORA18.2-201ENST00000383865 132 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 MIR544A-201ENST00000384855 91 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 MIR515-2-201ENST00000384883 83 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 MIR515-1-201ENST00000384884 83 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 MTCO1P21-201ENST00000416634 589 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 AL008629.1-201ENST00000438615 184 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 ART2BP-201ENST00000453501 499 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 TRBVA-201ENST00000498804 316 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 MTND3P5-201ENST00000512798 333 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 RNU2-10P-201ENST00000516375 211 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 MIR548AC-201ENST00000585049 88 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 AC016727.1-205ENST00000605437 569 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 AL512506.1-201ENST00000613918 449 ntBASIC0.57□□□□□ -2.32
TRAV4A0A0B4J268 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 RNU1-96P-201ENST00000364163 162 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 Y_RNA.338-201ENST00000365320 114 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 RNA5SP259-201ENST00000365541 109 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 MIR608-201ENST00000384820 100 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 AL591043.1-201ENST00000432461 424 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 AL117351.1-201ENST00000438864 766 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 MTCO3P9-201ENST00000506989 781 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 MTCO3P28-201ENST00000513351 515 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-197P-201ENST00000516680 100 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 MIR4698-201ENST00000577795 80 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 AL034555.1-201ENST00000604816 211 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 AC072039.2-201ENST00000608883 439 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 AC108706.1-201ENST00000611053 297 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 AC026585.1-201ENST00000619582 524 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 RMST_7.1-201ENST00000621935 268 ntBASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-769P-201ENST00000384407 104 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-1179P-201ENST00000384667 107 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 AL356776.1-201ENST00000406574 447 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 AL603825.1-201ENST00000438481 80 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 AC007327.1-201ENST00000447461 264 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 AC021146.8-201ENST00000507455 733 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 PDCD5P2-201ENST00000507570 312 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-1053P-201ENST00000515930 101 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 MIR4709-201ENST00000577272 72 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 MTCO2P2-201ENST00000591258 225 ntBASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-527P-201ENST00000363425 104 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-1285P-201ENST00000363480 105 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 SNORD114-27-201ENST00000363766 70 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-384P-201ENST00000364900 104 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-142P-201ENST00000384019 107 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 SNORA32.2-201ENST00000384049 122 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-413P-201ENST00000384115 107 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 CYCSP33-201ENST00000414485 327 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC006366.1-201ENST00000422002 759 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC004941.2-201ENST00000427009 228 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC073910.1-201ENST00000445047 438 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 ATP5EP1-201ENST00000510257 156 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC068587.4-201ENST00000533893 186 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AL442163.3-201ENST00000554110 156 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 MIR544B-201ENST00000582372 78 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 MIR3136-201ENST00000583498 78 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC008751.2-201ENST00000597885 980 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC008945.2-201ENST00000606056 604 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 AC091965.4-201ENST00000607691 587 ntBASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV4A0A0B4J268 MIR337-201ENST00000362281 93 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 AC114482.1-201ENST00000418010 247 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 MTCYBP39-201ENST00000437562 491 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 GTF2IP13-201ENST00000438487 386 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 BTBD7P2-201ENST00000441962 620 ntBASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.53□□□□□ -2.32
TRAV4A0A0B4J268 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms