Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RN7SL793P-201ENST00000583259 296 ntBASIC-0.16□□□□□ -2.44
TRAV30A0A087WSZ9 BNIP3P30-201ENST00000601184 574 ntBASIC-0.16□□□□□ -2.44
TRAV30A0A087WSZ9 AC068620.3-201ENST00000602749 560 ntBASIC-0.16□□□□□ -2.44
TRAV30A0A087WSZ9 CASC19-280ENST00000642102 1351 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 AL159152.1-201ENST00000635019 2587 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 Y_RNA.40-201ENST00000362645 93 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 RNY1-201ENST00000364228 113 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 SNORA4.2-201ENST00000365313 147 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 RNU6-843P-201ENST00000384454 104 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 RNA5SP219-201ENST00000390940 113 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 RNA5SP222-201ENST00000411039 105 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 AC005094.1-201ENST00000440420 368 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 AC002542.1-201ENST00000440683 193 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 SNRPGP12-201ENST00000449481 213 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 AL353778.1-201ENST00000603149 408 ntBASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV30A0A087WSZ9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 RNU6-839P-201ENST00000363347 108 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 SNORA42.1-201ENST00000363515 137 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AC123900.1-201ENST00000420390 96 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 MTCO3P45-201ENST00000443036 613 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 RNFT1P2-201ENST00000443064 757 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AC073910.1-201ENST00000445047 438 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 RNU7-90P-201ENST00000459216 62 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 RNU7-21P-201ENST00000459430 62 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AC092989.1-201ENST00000481235 277 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AC104629.1-201ENST00000494226 508 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AC009646.1-201ENST00000510455 318 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 RNU6-572P-201ENST00000516724 80 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AC011979.2-201ENST00000527568 352 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AC007834.2-201ENST00000536310 343 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AL358072.1-201ENST00000604156 575 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 AL390208.1-201ENST00000605885 644 ntBASIC-0.18□□□□□ -2.44
TRAV30A0A087WSZ9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 RNU6-862P-201ENST00000362804 105 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 RNA5SP63-201ENST00000391225 112 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 RNU2-23P-201ENST00000410545 195 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 TPMTP2-201ENST00000414372 726 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 MTCO2P5-201ENST00000422621 426 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 MTATP6P30-201ENST00000443540 664 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 NFU1P2-201ENST00000448700 469 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 AC090888.2-201ENST00000559765 1144 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 AC011195.1-201ENST00000578177 177 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 MIR5695-201ENST00000579717 85 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 AC084824.4-201ENST00000620106 731 ntBASIC-0.19□□□□□ -2.44
TRAV30A0A087WSZ9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 MIR330-201ENST00000362196 94 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 RNA5SP62-201ENST00000363457 110 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 MIR193B-201ENST00000384907 83 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 AL359704.1-201ENST00000411586 781 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 MTND1P21-201ENST00000412991 285 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 RPL23AP95-201ENST00000426806 265 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 USP9YP14-201ENST00000430663 563 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 RPL31P35-201ENST00000431058 377 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 MTND5P2-201ENST00000442927 1142 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 AC093809.1-201ENST00000509155 340 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 AC005741.1-201ENST00000511094 432 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 RNU4-77P-201ENST00000516692 156 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 MIR5190-201ENST00000581537 80 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 SNRPGP20-201ENST00000604477 205 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 AC008759.3-201ENST00000613300 508 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 AC078938.1-201ENST00000620993 318 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 MIR4315-1-201ENST00000636800 73 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 MIR4315-2-201ENST00000640925 73 ntBASIC-0.2□□□□□ -2.44
TRAV30A0A087WSZ9 RNU6-212P-201ENST00000362642 104 ntBASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 RNA5SP214-201ENST00000363378 118 ntBASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 RNU6-359P-201ENST00000365466 108 ntBASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 RNU6-815P-201ENST00000384080 113 ntBASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 SNORA75.2-201ENST00000391138 150 ntBASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 SNORA75.3-201ENST00000391231 150 ntBASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 ARL5AP1-201ENST00000418991 388 ntBASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV30A0A087WSZ9 GTF2IP12-201ENST00000456547 356 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms