Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AL137159.1-201ENST00000452808 512 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 RNU7-63P-201ENST00000459054 62 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 snoU13.14-201ENST00000459372 104 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 RPL30P1-201ENST00000488676 339 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 HMGB1P35-201ENST00000503360 598 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.9□□□□□ -2.11
RNF6Q9Y252 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.9□□□□□ -2.11
RNF6Q9Y252 AC105417.1-201ENST00000514691 285 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 RNA5SP137-201ENST00000516833 135 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 AL356057.1-201ENST00000533798 831 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF6Q9Y252 MTATP6P3-201ENST00000581686 676 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 RSL24D1P11-201ENST00000591045 491 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 AC091805.2-201ENST00000603848 235 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 AL136363.2-201ENST00000604173 851 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 AC098657.3-201ENST00000620434 263 ntBASIC1.9□□□□□ -2.11
RNF6Q9Y252 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 RNA5SP276-201ENST00000362580 94 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 RNU6-428P-201ENST00000362942 107 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 Y_RNA.159-201ENST00000363674 87 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 Y_RNA.381-201ENST00000365666 102 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 Y_RNA.480-201ENST00000384364 102 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 MIR29B2-201ENST00000385055 81 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 HMGN2P39-201ENST00000398005 273 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 SNORD56-201ENST00000413522 71 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 AL603825.1-201ENST00000438481 80 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 RN7SKP219-201ENST00000516825 296 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 CYCSP27-201ENST00000527643 293 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 NDUFA5P6-201ENST00000542110 379 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 SNRPGP17-201ENST00000603780 214 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 AC007684.1-201ENST00000609671 477 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 AL159153.1-201ENST00000619688 317 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF6Q9Y252 AC090582.1-201ENST00000636321 199 ntBASIC1.89□□□□□ -2.11
RNF6Q9Y252 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RNF6Q9Y252 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF6Q9Y252 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
RNF6Q9Y252 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF6Q9Y252 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF6Q9Y252 RNU6-552P-201ENST00000362869 119 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 Y_RNA.77-201ENST00000362962 107 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 RNU6-1222P-201ENST00000384615 107 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 RNU6-903P-201ENST00000391270 109 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 Y_RNA.597-201ENST00000410463 100 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF6Q9Y252 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.88□□□□□ -2.11
RNF6Q9Y252 AL445646.1-201ENST00000431784 216 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 AC002486.1-201ENST00000435098 391 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 AL451074.3-201ENST00000437709 472 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF6Q9Y252 HMGB1P18-201ENST00000438801 619 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 GMFBP1-201ENST00000467831 427 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF6Q9Y252 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF6Q9Y252 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RNF6Q9Y252 Y_RNA.688-201ENST00000516565 95 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 RNU6-295P-201ENST00000516901 104 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 AP005435.4-201ENST00000529514 284 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 MIR5583-1-201ENST00000580941 59 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 AC078899.2-201ENST00000595282 212 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 RN7SKP299-201ENST00000606679 301 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 AC104073.3-201ENST00000610942 955 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 KPNA2P1-201ENST00000458289 1591 ntBASIC1.88□□□□□ -2.11
RNF6Q9Y252 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 RNU6-1159P-201ENST00000362933 107 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 RNU5A-6P-201ENST00000384136 116 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 RNU6-517P-201ENST00000384362 110 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 RPS15AP10-201ENST00000432472 382 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 AC243964.1-201ENST00000441814 261 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 AL356010.1-201ENST00000456364 102 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 RN7SKP256-201ENST00000517201 314 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 AC109479.2-201ENST00000517842 174 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 AC004223.2-201ENST00000590309 544 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 AC110760.3-201ENST00000598794 467 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms