Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 DEFB122-202ENST00000569013 197 ntBASIC2.03□□□□□ -2.08
SMC3Q9UQE7 AC104581.2-201ENST00000572227 430 ntBASIC2.03□□□□□ -2.08
SMC3Q9UQE7 AC026271.5-201ENST00000577873 130 ntBASIC2.03□□□□□ -2.08
SMC3Q9UQE7 RPL30P11-203ENST00000598995 310 ntBASIC2.03□□□□□ -2.08
SMC3Q9UQE7 AC123912.5-201ENST00000605470 343 ntBASIC2.03□□□□□ -2.08
SMC3Q9UQE7 AC008536.2-201ENST00000607284 349 ntBASIC2.03□□□□□ -2.08
SMC3Q9UQE7 AC097372.5-201ENST00000623665 376 ntBASIC2.03□□□□□ -2.08
SMC3Q9UQE7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 RNU6-715P-201ENST00000365204 103 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 PIGFP2-201ENST00000421400 651 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AL669831.1-202ENST00000428504 417 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 GTF2IP13-201ENST00000438487 386 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 RPS3AP17-201ENST00000472594 777 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 RNA5SP182-201ENST00000516064 82 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 SNORD27.1-201ENST00000516319 72 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 IMMP1LP2-201ENST00000552954 492 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AC087683.1-201ENST00000591187 441 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 SNRPGP17-201ENST00000603780 214 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AC091805.2-201ENST00000603848 235 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 ELOCP5-201ENST00000604924 333 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AC007684.1-201ENST00000609671 477 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.02□□□□□ -2.09
SMC3Q9UQE7 AC026585.1-201ENST00000619582 524 ntBASIC2.02□□□□□ -2.09
SMC3Q9UQE7 RNU6-1287P-201ENST00000362914 107 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 Y_RNA.372-201ENST00000365599 102 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 RNU6-622P-201ENST00000384272 103 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 SNORA8-201ENST00000384574 139 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 RNU6-1060P-201ENST00000384664 107 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 MIR454-201ENST00000390180 115 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 RNU6-1158P-201ENST00000391167 107 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 CALM2P3-201ENST00000400429 449 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 CYCSP33-201ENST00000414485 327 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AL137159.1-201ENST00000452808 512 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 RNU7-182P-201ENST00000459009 62 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 RN7SKP298-201ENST00000515950 94 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 SNORA43.2-201ENST00000516652 128 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 Y_RNA.704-201ENST00000516851 102 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AF250324.2-201ENST00000608299 610 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 uc_338.15-201ENST00000615470 191 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 RMST_4.1-201ENST00000616886 107 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.01□□□□□ -2.09
SMC3Q9UQE7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.01□□□□□ -2.09
SMC3Q9UQE7 MTND5P26-201ENST00000426018 1752 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2□□□□□ -2.09
SMC3Q9UQE7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2□□□□□ -2.09
SMC3Q9UQE7 MIR186-201ENST00000384988 86 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RNU2-3P-201ENST00000410144 191 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RNA5SP390-201ENST00000410191 113 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RNU2-48P-201ENST00000410694 191 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RPS20P15-201ENST00000412792 311 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AC074117.2-201ENST00000417130 397 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 MTATP6P18-201ENST00000417994 673 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AC010975.2-201ENST00000427781 588 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AL606489.2-201ENST00000433886 234 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2□□□□□ -2.09
SMC3Q9UQE7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2□□□□□ -2.09
SMC3Q9UQE7 AC022364.2-201ENST00000457963 554 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AP001025.1-201ENST00000486139 332 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2□□□□□ -2.09
SMC3Q9UQE7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2□□□□□ -2.09
SMC3Q9UQE7 CCDC34P1-201ENST00000507441 517 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AC108078.1-201ENST00000508073 725 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AC104136.1-201ENST00000512969 394 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RNU2-53P-201ENST00000516257 147 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RNU6-405P-201ENST00000516637 110 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RNA5SP503-201ENST00000517047 117 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 RNU6-586P-201ENST00000517265 104 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 MIR4703-201ENST00000577728 79 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2□□□□□ -2.09
SMC3Q9UQE7 AC010928.2-201ENST00000588017 287 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2□□□□□ -2.09
SMC3Q9UQE7 AL359314.1-201ENST00000616913 261 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 AC009161.2-201ENST00000624626 138 ntBASIC2□□□□□ -2.09
SMC3Q9UQE7 SEPT14P19-203ENST00000633205 211 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms