Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 OR56A5-201ENST00000340110 738 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 Y_RNA.5-201ENST00000362334 102 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 Y_RNA.324-201ENST00000365165 102 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU6-1040P-201ENST00000383974 107 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU6-214P-201ENST00000384130 107 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 Y_RNA.473-201ENST00000384333 102 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 SNORA3.2-201ENST00000408221 125 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 U3.37-201ENST00000408528 213 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU6-1050P-201ENST00000410388 107 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 CYCSP33-201ENST00000414485 327 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU6-976P-201ENST00000516086 111 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU1-86P-201ENST00000516108 154 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 Y_RNA.670-201ENST00000516255 105 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU1-107P-201ENST00000516617 154 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 Y_RNA.708-201ENST00000516950 96 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU1-54P-201ENST00000517181 120 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 RNU6-988P-201ENST00000519081 107 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 AC018462.2-201ENST00000605375 395 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 PISRT1.1-201ENST00000616930 107 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 AC064859.1-201ENST00000624741 174 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 AC092593.1-201ENST00000515413 1815 ntBASIC3.28□□□□□ -1.88
SCAF8Q9UPN6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SCAF8Q9UPN6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SCAF8Q9UPN6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RNU6-1115P-201ENST00000362490 106 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 SNORD56.3-201ENST00000363507 71 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RNU6-384P-201ENST00000364900 104 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 Z98749.2-208ENST00000381646 500 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.404-201ENST00000383978 102 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RNU6-890P-201ENST00000384121 107 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.459-201ENST00000384251 102 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 MIR10A-201ENST00000385043 110 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.594-201ENST00000410373 140 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AC113618.1-201ENST00000416747 285 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AC104332.2-201ENST00000429959 156 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RPS15AP5-201ENST00000436276 388 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 MTND3P2-201ENST00000438452 342 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RPL21P2-201ENST00000440049 481 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RNU7-138P-201ENST00000459479 64 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RN7SL633P-201ENST00000488974 297 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RPS29P20-201ENST00000489592 171 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AC096745.1-201ENST00000509945 370 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AC092436.3-201ENST00000511788 257 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RNU6-1046P-201ENST00000516538 107 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AC107016.2-201ENST00000547968 190 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 MIR4769-201ENST00000584126 77 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 AC092608.2-201ENST00000624427 218 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 ADAM3A-203ENST00000461344 2157 ntBASIC3.27□□□□□ -1.89
SCAF8Q9UPN6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 SNORD62.1-201ENST00000362541 86 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 U8.2-201ENST00000363156 134 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.148-201ENST00000363557 117 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 RNU6-306P-201ENST00000384617 107 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 MIR518D-201ENST00000385014 87 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 RNA5SP354-201ENST00000391247 136 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 RNA5SP274-201ENST00000410484 108 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 AL096701.2-201ENST00000416920 238 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 AL035666.1-201ENST00000446195 348 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 RPL7P42-201ENST00000481005 679 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 PTP4A1P4-201ENST00000512479 322 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 RNA5SP24-201ENST00000516478 95 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 RN7SKP295-201ENST00000517264 153 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 AC078899.3-201ENST00000599065 212 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 AL161423.1-201ENST00000613700 262 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 MTND4P1-201ENST00000457501 1466 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
SCAF8Q9UPN6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms