Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 PCMTD1P1-201ENST00000455560 355 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 CKS1BP2-201ENST00000497342 240 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 HMGN1P12-201ENST00000499125 195 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AP005902.1-201ENST00000521358 186 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AP005639.2-201ENST00000527592 928 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 HSPE1P4-201ENST00000550617 308 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AC027176.1-201ENST00000560204 514 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 MIR3616-201ENST00000584070 92 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AC091135.1-201ENST00000585943 307 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 RPL30P11-203ENST00000598995 310 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 MIR3976-201ENST00000606807 139 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AC009541.1-201ENST00000438279 2662 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 RNU1-35P-201ENST00000362782 153 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 RNU6-227P-201ENST00000362865 103 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 RNU6-306P-201ENST00000384617 107 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 MIR512-1-201ENST00000384913 84 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 MTND4LP11-201ENST00000422184 280 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 USP9YP8-201ENST00000441913 500 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AL353572.1-201ENST00000442490 417 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AC090515.1-201ENST00000465295 476 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AC114801.2-201ENST00000503825 781 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AC091826.1-201ENST00000514065 313 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AC007375.1-201ENST00000554513 578 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AL670379.2-201ENST00000604983 252 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AC019193.3-201ENST00000609144 554 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 AC022306.2-201ENST00000617563 647 ntBASIC2.68□□□□□ -1.98
HCN3Q9P1Z3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 Y_RNA.88-201ENST00000363029 99 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 SNORA80A-201ENST00000363922 136 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 MIR517A-201ENST00000385001 87 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 MIR181B1-201ENST00000385240 110 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 RN7SKP284-201ENST00000411002 343 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AP000275.1-201ENST00000411943 390 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AC087499.2-201ENST00000432861 149 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AL121594.1-201ENST00000475906 575 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 RPS27P27-201ENST00000498779 255 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AC103851.1-201ENST00000506833 274 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AC091874.1-201ENST00000511402 339 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 RNA5SP367-201ENST00000516557 118 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AC115990.1-201ENST00000526957 301 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AC243960.4-201ENST00000600532 288 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 uc_338.5-201ENST00000611839 155 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AC104237.2-201ENST00000612456 443 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 MIR6128-201ENST00000615528 109 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AC090517.3-201ENST00000625170 141 ntBASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HCN3Q9P1Z3 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AC080100.1-201ENST00000624239 5356 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 SNORD62.1-201ENST00000362541 86 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 RNU6-1141P-201ENST00000364520 107 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 MIR181A2-201ENST00000384863 110 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 MIR548F5-201ENST00000408421 86 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 PDCL2P1-201ENST00000419302 352 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AC244670.1-201ENST00000436879 112 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AC104389.3-201ENST00000445629 235 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AC080013.2-201ENST00000460866 323 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 RNU1-54P-201ENST00000517181 120 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 POLR3GP2-201ENST00000588366 668 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AL355073.2-201ENST00000612106 557 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 AL159153.1-201ENST00000619688 317 ntBASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCN3Q9P1Z3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.65□□□□□ -1.98
HCN3Q9P1Z3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms