Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-581P-201ENST00000516214 105 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AP000889.1-201ENST00000530968 660 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 ANP32BP3-201ENST00000559213 706 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AC093249.1-201ENST00000567049 203 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AC018462.2-201ENST00000605375 395 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AP000654.2-201ENST00000605633 586 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AC009229.3-201ENST00000608056 282 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AL669831.3-213ENST00000636676 183 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 MIR6073-201ENST00000352083 89 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 MIR369-201ENST00000362155 70 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-78P-201ENST00000362897 107 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-1317P-201ENST00000364582 104 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-593P-201ENST00000364716 112 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNU5E-7P-201ENST00000365290 117 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-198P-201ENST00000384258 104 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-310P-201ENST00000384655 107 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 U3.37-201ENST00000408528 213 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.594-201ENST00000410373 140 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNA5SP21-201ENST00000410917 96 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.646-201ENST00000410980 101 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNU2-25P-201ENST00000411041 191 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AL117339.3-201ENST00000418733 162 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 BPY2DP-201ENST00000422208 265 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 MTCO2P12-201ENST00000427426 682 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 Z82205.1-201ENST00000428456 297 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AC236972.1-201ENST00000433225 199 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AC105272.1-201ENST00000438604 198 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AC107083.1-201ENST00000439643 279 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AC025750.2-201ENST00000442609 450 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 HIGD1AP2-201ENST00000446367 280 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.653-201ENST00000459091 95 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AIG1P1-201ENST00000503376 148 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 MIR5690-201ENST00000583739 73 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AL137843.1-201ENST00000605078 385 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AC080078.3-201ENST00000605407 463 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 MIR3976-201ENST00000606807 139 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 AC007742.2-201ENST00000618226 398 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-942P-201ENST00000363002 107 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.132-201ENST00000363421 102 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.315-201ENST00000365117 102 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 U8.8-201ENST00000365399 135 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-790P-201ENST00000384479 105 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-293P-201ENST00000411259 106 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AL714022.1-201ENST00000439897 151 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 PCMTD1P1-201ENST00000455560 355 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 SNORD5.1-201ENST00000458800 75 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 RNU7-152P-201ENST00000458982 64 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AC128713.1-201ENST00000471495 306 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AK3P2-201ENST00000507976 429 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 PTP4A1P4-201ENST00000512479 322 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AC093303.1-201ENST00000514549 295 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-377P-201ENST00000515965 102 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.708-201ENST00000516950 96 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 SNORA31.21-201ENST00000517180 77 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 LARP7P3-201ENST00000579888 337 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AC011494.1-201ENST00000596454 237 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AC009314.1-201ENST00000603871 304 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AL133215.3-201ENST00000609801 448 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 MIR6134-201ENST00000617606 109 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 AC098657.3-201ENST00000620434 263 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 U4.7-201ENST00000638126 106 ntBASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.68□□□□□ -1.98
SMARCAL1Q9NZC9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.67□□□□□ -1.98
SMARCAL1Q9NZC9 XGY1-201ENST00000381172 446 ntBASIC2.67□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-842P-201ENST00000384269 107 ntBASIC2.67□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-331P-201ENST00000384724 107 ntBASIC2.67□□□□□ -1.98
SMARCAL1Q9NZC9 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms