Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AC012308.1-201ENST00000451232 178 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 RNU7-120P-201ENST00000459334 63 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 RN7SL807P-201ENST00000470923 297 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 AC084357.1-201ENST00000473404 255 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 AC117440.1-201ENST00000474107 571 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 PPBPP1-201ENST00000510807 373 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 SNORA25.14-201ENST00000516481 132 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 RNU6-567P-201ENST00000516746 107 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 AC009163.5-201ENST00000575421 637 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 AL591424.2-201ENST00000617023 128 ntBASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEM39AQ9NV64 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 AC011266.1-201ENST00000624119 3569 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 MAPK10-253ENST00000641010 4072 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 MFSD8-236ENST00000641509 4050 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 RNU6-746P-201ENST00000384112 109 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 RNU6-1145P-201ENST00000384246 107 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 Y_RNA.464-201ENST00000384282 110 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 RNU6-378P-201ENST00000384324 107 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 RN7SKP61-201ENST00000410642 295 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 Y_RNA.626-201ENST00000411288 95 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 AL358075.3-201ENST00000426289 226 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 HMGN2P10-201ENST00000448085 265 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 AP001486.1-201ENST00000463339 476 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 AL049873.1-201ENST00000480540 376 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 AC100770.1-201ENST00000532310 322 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 AL162424.1-201ENST00000602325 221 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 AL359198.2-201ENST00000611836 194 ntBASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TMEM39AQ9NV64 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AL157777.2-201ENST00000258070 137 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 SNORA25.1-201ENST00000362326 128 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 RNA5SP502-201ENST00000362694 119 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 SNORD74.4-201ENST00000364129 80 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 SNORA38.1-201ENST00000364172 131 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AC099548.1-201ENST00000421443 426 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AC078809.1-201ENST00000427601 140 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 CYCSP4-201ENST00000429682 331 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 snoU13.6-201ENST00000458785 104 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AL391261.3-201ENST00000557194 520 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 AL110115.1-201ENST00000614396 364 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 ADAM3A-203ENST00000461344 2157 ntBASIC4.12□□□□□ -1.75
TMEM39AQ9NV64 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AC007656.2-201ENST00000624902 4547 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 SNORD9-201ENST00000362566 104 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 SNORD115-8-201ENST00000363856 82 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 RNU6-961P-201ENST00000363893 105 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 RNU6-270P-201ENST00000364131 105 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 Y_RNA.292-201ENST00000364904 97 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 SNORD115-38-201ENST00000365037 82 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 U3.19-201ENST00000390893 196 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AL390729.2-201ENST00000416137 156 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AC244670.1-201ENST00000436879 112 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 RPL21P104-201ENST00000464143 478 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AC006517.1-201ENST00000480485 328 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 SNORA40.9-201ENST00000515895 93 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 CKS1BP7-201ENST00000522230 235 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AC087441.2-201ENST00000529141 262 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AC011602.1-201ENST00000546484 331 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AC021231.3-201ENST00000558497 370 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms