Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC244670.1-201ENST00000436879 112 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 RPL21P99-201ENST00000480369 423 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AC018868.1-201ENST00000491307 315 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 HMGB1P35-201ENST00000503360 598 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AL034555.1-201ENST00000604816 211 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AC004492.1-201ENST00000607036 742 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 AC068137.3-201ENST00000639191 341 ntBASIC2.56□□□□□ -2
BLOC1S4Q9NUP1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 RNU6-611P-201ENST00000384276 104 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 MIR181A1-201ENST00000385026 110 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AC245102.2-201ENST00000448956 180 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 MTND3P16-201ENST00000452205 344 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 RNU6-1208P-201ENST00000459588 107 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AC087884.1-201ENST00000469738 328 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AC016632.1-201ENST00000503994 196 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 RNA5SP281-201ENST00000516504 135 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 RNU6-1069P-201ENST00000516612 133 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 RNU7-193P-201ENST00000516723 65 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 RNU6-667P-201ENST00000517186 102 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AL157687.1-201ENST00000554853 619 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 MIR4529-201ENST00000578110 78 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 DISC2.1-201ENST00000612827 205 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 AC012640.5-201ENST00000623897 319 ntBASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
BLOC1S4Q9NUP1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 RNU4-82P-201ENST00000362443 140 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 Y_RNA.111-201ENST00000363248 100 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 MIR514A2-201ENST00000385131 88 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 MIR514A3-201ENST00000385132 88 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 AL137159.1-201ENST00000452808 512 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 SNRPGP7-201ENST00000469016 106 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 SNORA19.2-201ENST00000516013 114 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 HSPE1P4-201ENST00000550617 308 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 AL031274.2-201ENST00000599419 203 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 AC093783.1-201ENST00000612976 329 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 SNORD98-201ENST00000636377 67 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 MTND5P6-201ENST00000422338 1798 ntBASIC2.54□□□□□ -2
BLOC1S4Q9NUP1 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 MIR449A-201ENST00000362113 91 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AP000275.1-201ENST00000411943 390 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 DLGAP5P1-201ENST00000430307 464 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AL133396.1-201ENST00000432048 687 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AC132942.1-201ENST00000486753 483 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 RNA5SP24-201ENST00000516478 95 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 RNU6-314P-201ENST00000516574 104 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 RNU6-567P-201ENST00000516746 107 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 RNU6-323P-201ENST00000521915 107 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AC007375.1-201ENST00000554513 578 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 ZNF519P2-201ENST00000557032 169 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 RPS3AP23-202ENST00000574601 686 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AP001836.1-201ENST00000604675 523 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AL357078.3-201ENST00000607528 618 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AC092807.2-201ENST00000609367 243 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 AC121333.1-201ENST00000567488 2709 ntBASIC2.53□□□□□ -2
BLOC1S4Q9NUP1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 RNU4-75P-201ENST00000364621 146 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 SNORD32A-201ENST00000364805 84 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC019205.3-201ENST00000424573 156 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 RPL23AP95-201ENST00000426806 265 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 UBE2DNL-203ENST00000474922 222 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC107032.1-201ENST00000485945 480 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC114801.2-201ENST00000503825 781 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms