Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC006483.1-201ENST00000487308 313 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AC116655.1-201ENST00000508324 901 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 MTCYBP40-201ENST00000509390 1135 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.675-201ENST00000516389 149 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 IMMP1LP2-201ENST00000552954 492 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 TRAV32-201ENST00000553993 340 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AC105137.2-201ENST00000569073 466 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AL160281.1-201ENST00000605307 311 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AC016727.1-205ENST00000605437 569 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AC110774.1-201ENST00000623567 2018 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 MTND4P29-201ENST00000503122 1372 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 RNU4-79P-201ENST00000362764 141 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 RNU6-428P-201ENST00000362942 107 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 XGY1-201ENST00000381172 446 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 AL161651.1-201ENST00000440882 223 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 AC006026.2-201ENST00000457376 180 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 MRPL42P6-201ENST00000486397 371 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 RNU6-377P-201ENST00000515965 102 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 SNORD19.2-201ENST00000516978 73 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 AC103996.1-201ENST00000555468 102 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 MIR4672-201ENST00000583126 81 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SIX2Q9NPC8 AL136360.1-201ENST00000503377 1900 ntBASIC2.44□□□□□ -2.02
SIX2Q9NPC8 RNU6-105P-201ENST00000363909 104 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.387-201ENST00000383918 102 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.535-201ENST00000384612 99 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SIX2Q9NPC8 RNU6-1106P-201ENST00000390845 107 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AL030996.1-201ENST00000411430 235 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.43□□□□□ -2.02
SIX2Q9NPC8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.632-201ENST00000459189 102 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 RNU6-1037P-201ENST00000459571 107 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC116337.1-201ENST00000509680 687 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC107222.1-201ENST00000510899 637 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC009314.1-201ENST00000603871 304 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AL161423.1-201ENST00000613700 262 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 MIR6128-201ENST00000615528 109 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC244517.12-201ENST00000623581 663 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AL359757.2-201ENST00000624309 274 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 Z82195.2-201ENST00000612348 18351 ntBASIC2.43□□□□□ -2.02
SIX2Q9NPC8 AC008669.1-201ENST00000565823 2178 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AC073544.1-201ENST00000600110 1595 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 MTND4P23-201ENST00000447723 1363 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.58-201ENST00000362807 102 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.67-201ENST00000362870 100 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.151-201ENST00000363566 112 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.154-201ENST00000363624 102 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU6-593P-201ENST00000364716 112 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU6-336P-201ENST00000364891 107 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNY3P1-201ENST00000365085 102 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNY3-201ENST00000365484 102 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.384-201ENST00000383909 102 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.482-201ENST00000384377 111 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.490-201ENST00000384413 102 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.510-201ENST00000384511 114 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 SNORD116-20-201ENST00000384529 92 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU6-601P-201ENST00000384540 107 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU6-750P-201ENST00000390946 107 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU1-101P-201ENST00000391171 127 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RPS29P13-201ENST00000402041 169 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU6-293P-201ENST00000411259 106 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AC096649.2-201ENST00000416186 393 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RPS15AP10-201ENST00000432472 382 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AK3P2-201ENST00000507976 429 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU6-559P-201ENST00000516151 98 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNA5SP281-201ENST00000516504 135 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU6-1016P-201ENST00000516689 94 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 ACA59.2-201ENST00000517061 156 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms