Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 SNORA48.11-201ENST00000517015 89 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 SNORA25.17-201ENST00000517184 124 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AP003392.2-201ENST00000527269 208 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AP005639.2-201ENST00000527592 928 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC022880.1-201ENST00000534017 973 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC073648.5-201ENST00000603502 305 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC005034.5-201ENST00000604219 466 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 ELOCP5-201ENST00000604924 333 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC063943.3-201ENST00000615562 356 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 AC022418.1-201ENST00000624118 445 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 U4.7-201ENST00000638126 106 ntBASIC1.54□□□□□ -2.16
HMG20AQ9NP66 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMG20AQ9NP66 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 RNU6-552P-201ENST00000362869 119 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 RNU6-1120P-201ENST00000362988 108 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 RNA5SP240-201ENST00000365355 128 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 BTF3L4P1-201ENST00000413813 468 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 RPL39P29-201ENST00000447779 157 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 RPL23AP3-201ENST00000453844 468 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC022364.2-201ENST00000457963 554 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC087884.1-201ENST00000469738 328 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC117503.1-201ENST00000472241 394 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 RNA5SP182-201ENST00000516064 82 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 RNU6-965P-201ENST00000516721 96 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 RNU6-667P-201ENST00000517186 102 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC109329.1-201ENST00000518744 317 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 CYCSP27-201ENST00000527643 293 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC104581.2-201ENST00000572227 430 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 MIR3126-201ENST00000577443 74 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC007684.1-201ENST00000609671 477 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC004908.3-201ENST00000610248 625 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC087241.4-201ENST00000612441 480 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AL159153.1-201ENST00000619688 317 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AP003400.5-201ENST00000624827 617 ntBASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.53□□□□□ -2.16
HMG20AQ9NP66 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.53□□□□□ -2.17
HMG20AQ9NP66 AC008555.8-201ENST00000623602 2168 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 RNU6-1210P-201ENST00000363775 107 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 RNU6-105P-201ENST00000363909 104 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 SNORD116-9-201ENST00000384000 95 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 SNORD116-3-201ENST00000384287 95 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 SNORD116-7-201ENST00000384404 95 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 SNORD116-5-201ENST00000384462 95 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 RNU6-692P-201ENST00000384496 107 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 MIR561-201ENST00000385216 97 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 RNU6-1158P-201ENST00000391167 107 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AL591043.1-201ENST00000432461 424 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC016691.1-201ENST00000441321 413 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC243964.1-201ENST00000441814 261 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 SNRPGP7-201ENST00000469016 106 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 RPS3AP17-201ENST00000472594 777 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 CCDC34P1-201ENST00000507441 517 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC034114.1-201ENST00000520293 285 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 MTND2P38-201ENST00000522536 667 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC023050.3-201ENST00000541142 333 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 HIF1AP1-201ENST00000553642 175 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC110588.1-201ENST00000559699 137 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 MIR4529-201ENST00000578110 78 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 MIR3611-201ENST00000584484 83 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 AC008121.3-201ENST00000618726 433 ntBASIC1.52□□□□□ -2.17
HMG20AQ9NP66 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
HMG20AQ9NP66 RNU6-266P-201ENST00000364225 107 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RNU6-336P-201ENST00000364891 107 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMG20AQ9NP66 Y_RNA.409-201ENST00000383990 98 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RNU6-434P-201ENST00000384376 107 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 CBX3P9-201ENST00000402326 552 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RNU2-29P-201ENST00000410423 189 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms