Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNU6-566P-201ENST00000516790 107 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC109329.2-201ENST00000519658 482 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AP005902.1-201ENST00000521358 186 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC087241.2-201ENST00000535801 324 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC011712.1-201ENST00000588959 234 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AL133215.3-201ENST00000609801 448 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC092593.1-201ENST00000515413 1815 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 SNORA25.6-201ENST00000364121 118 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 RNU6-1013P-201ENST00000384180 107 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 RNU6-1274P-201ENST00000384557 107 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 RNU6-510P-201ENST00000391239 108 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AL591034.2-201ENST00000402839 359 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AC007064.1-201ENST00000412238 351 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 MTND3P8-201ENST00000412909 339 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 U8.21-201ENST00000459536 136 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AC003982.1-202ENST00000469928 248 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AC083906.5-201ENST00000503722 328 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 PRDX4P1-201ENST00000507189 574 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 SCARNA13-201ENST00000516672 275 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 RNA5SP454-201ENST00000517231 127 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AP005639.2-201ENST00000527592 928 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AL078605.1-201ENST00000603529 500 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 MIR6895-201ENST00000613497 78 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AL449363.1-201ENST00000617815 186 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AC005858.4-201ENST00000623191 700 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 SNORD98-201ENST00000636377 67 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 AP000560.1-201ENST00000624150 1937 ntBASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHMP1AQ9HD42 CBX3P1-201ENST00000325243 554 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 MIR422A-201ENST00000362286 90 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 RNU1-23P-201ENST00000363361 144 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 SNORA36A-201ENST00000384221 132 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 Y_RNA.504-201ENST00000384481 104 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 MIR670-201ENST00000390142 98 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 SNORA26.3-201ENST00000391119 136 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 BTF3L4P2-201ENST00000392798 346 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AL138885.1-201ENST00000405921 675 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 RNU2-63P-201ENST00000410792 194 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AL590135.1-201ENST00000422215 156 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC019205.3-201ENST00000424573 156 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC016700.2-201ENST00000446011 156 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 RPS3P1-201ENST00000456781 192 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 CYP2C59P-201ENST00000457790 269 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC015911.1-201ENST00000495111 156 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC022447.4-201ENST00000504053 364 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 RNU6-586P-201ENST00000517265 104 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AL034555.1-201ENST00000604816 211 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC018889.1-201ENST00000605372 397 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 MIR3976-201ENST00000606807 139 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC090517.3-201ENST00000625170 141 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC099654.14-201ENST00000638599 341 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 AC009541.1-201ENST00000438279 2662 ntBASIC2.35□□□□□ -2.03
CHMP1AQ9HD42 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC073346.2-201ENST00000624724 2058 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 RNU4-15P-201ENST00000362613 141 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC138393.2-201ENST00000414742 246 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 RPL21P111-201ENST00000418453 477 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 MTND1P17-201ENST00000448961 204 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC016632.1-201ENST00000503994 196 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC116353.2-201ENST00000505332 712 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 SNORA48.11-201ENST00000517015 89 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC060766.3-201ENST00000591442 263 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC078795.3-201ENST00000602913 472 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AL355297.2-201ENST00000604792 129 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms