Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC015911.1-201ENST00000495111 156 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 SNORD116.3-201ENST00000517176 78 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
VPS16Q9H269 AL161670.1-201ENST00000554348 137 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 AC025281.1-201ENST00000567026 265 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 MIR5004-201ENST00000579078 107 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS16Q9H269 AC092447.9-201ENST00000603395 144 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS16Q9H269 SCARNA4-202ENST00000625402 129 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 AC091812.1-201ENST00000432235 1948 ntBASIC3.19□□□□□ -1.9
VPS16Q9H269 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS16Q9H269 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
VPS16Q9H269 Y_RNA.176-201ENST00000363815 109 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 RNA5SP139-201ENST00000364340 117 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 SNORA71.1-201ENST00000364523 117 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 RNU6-450P-201ENST00000364654 107 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 RNU6-702P-201ENST00000364982 107 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 Y_RNA.428-201ENST00000384078 102 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 RNU6-72P-201ENST00000384285 79 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 RNU6-1222P-201ENST00000384615 107 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 MIR517A-201ENST00000385001 87 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 MIR518D-201ENST00000385014 87 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 RNA5SP354-201ENST00000391247 136 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 SNORA26.7-201ENST00000391288 122 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 AC023141.4-201ENST00000412031 328 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS16Q9H269 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS16Q9H269 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS16Q9H269 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS16Q9H269 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS16Q9H269 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS16Q9H269 AC006026.2-201ENST00000457376 180 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 AC010655.3-201ENST00000478818 450 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 AC006445.1-201ENST00000491925 405 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS16Q9H269 RNU6-635P-201ENST00000516651 102 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 AC009812.2-201ENST00000517657 457 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 AC023442.1-201ENST00000531247 422 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS16Q9H269 PRR13P7-201ENST00000605538 430 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 RNU6-85P-201ENST00000605989 107 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 AC091953.5-201ENST00000622919 233 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 AC090617.7-201ENST00000623952 126 ntBASIC3.18□□□□□ -1.9
VPS16Q9H269 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VPS16Q9H269 SNORA38.1-201ENST00000364172 131 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 RNU6-1280P-201ENST00000365211 107 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 SNORA41-201ENST00000384675 132 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 RNU6-823P-201ENST00000391042 103 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AL590004.2-201ENST00000404787 371 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 MIR1302-3-201ENST00000408128 138 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS16Q9H269 RNU6-293P-201ENST00000411259 106 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AC096664.2-201ENST00000411843 406 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AL096701.2-201ENST00000416920 238 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS16Q9H269 DPH3P2-201ENST00000422618 250 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS16Q9H269 HIGD1AP2-201ENST00000446367 280 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS16Q9H269 AP002404.1-201ENST00000532005 451 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 GNAI2P1-201ENST00000541815 315 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AC006199.1-201ENST00000548728 219 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AC074050.1-201ENST00000563247 211 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS16Q9H269 AP000787.2-201ENST00000604432 568 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 YPEL5P2-201ENST00000605553 359 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AC090115.4-201ENST00000609970 188 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS16Q9H269 AC007792.1-201ENST00000623023 402 ntBASIC3.17□□□□□ -1.9
VPS16Q9H269 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS16Q9H269 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS16Q9H269 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VPS16Q9H269 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS16Q9H269 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS16Q9H269 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS16Q9H269 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS16Q9H269 RNU6-238P-201ENST00000363313 106 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 SNORA63.7-201ENST00000365579 123 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 Y_RNA.389-201ENST00000383924 113 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 Y_RNA.512-201ENST00000384518 102 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 AC096649.2-201ENST00000416186 393 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS16Q9H269 AL133396.1-201ENST00000432048 687 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS16Q9H269 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS16Q9H269 AC011816.1-201ENST00000441346 546 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 CHEK2P4-201ENST00000450340 246 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 AL353752.1-201ENST00000454946 260 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 snoU109.2-201ENST00000459316 135 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 SNORD19.2-201ENST00000516978 73 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.16□□□□□ -1.9
VPS16Q9H269 AP004607.1-201ENST00000524456 203 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
VPS16Q9H269 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS16Q9H269 AC109446.1-201ENST00000566172 220 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 OR1M4P-201ENST00000589199 287 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 AC008121.1-201ENST00000603244 268 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 AC107871.2-201ENST00000612894 502 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms