Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL162395.1-201ENST00000457882 422 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 TPTE2P5-203ENST00000458118 728 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 RPS29P15-201ENST00000458329 171 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 SNORA43.2-201ENST00000516652 128 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 RNA5SP503-201ENST00000517047 117 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AC107953.1-201ENST00000522216 297 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AL136363.2-201ENST00000604173 851 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 ELOCP5-201ENST00000604924 333 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 MIR6715A-201ENST00000615929 79 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 uc_338.20-201ENST00000621563 178 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 AC241585.2-209ENST00000638217 143 ntBASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
CCSER1Q9C0I3 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 RNU6-116P-201ENST00000384042 109 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 MIR29B2-201ENST00000385055 81 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 RNU6-550P-201ENST00000391057 101 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 RNU4-55P-201ENST00000410731 137 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AC074117.2-201ENST00000417130 397 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 MTND1P18-201ENST00000448191 573 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 FDX1P2-201ENST00000450769 375 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AL137159.1-201ENST00000452808 512 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 snoU13.14-201ENST00000459372 104 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 GMFBP1-201ENST00000467831 427 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AC006512.1-201ENST00000468816 291 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AC105417.1-201ENST00000514691 285 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 RN7SKP256-201ENST00000517201 314 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 SNORA31.23-201ENST00000517219 133 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 MIR4703-201ENST00000577728 79 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AC008945.2-201ENST00000606056 604 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AC008536.2-201ENST00000607284 349 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 RMST_4.1-201ENST00000616886 107 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AC073534.2-201ENST00000620377 381 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 AC090517.3-201ENST00000625170 141 ntBASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CCSER1Q9C0I3 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 SNORD116-4-201ENST00000384733 96 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 SNORA26.9-201ENST00000391322 122 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 CBX3P9-201ENST00000402326 552 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AL512604.1-201ENST00000404812 257 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 RNU4-46P-201ENST00000410818 138 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 RPL21P90-201ENST00000415692 466 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AL360271.2-201ENST00000447710 161 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AL121594.1-201ENST00000475906 575 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AC107401.1-201ENST00000503426 685 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AP003034.1-201ENST00000534621 422 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AC110588.1-201ENST00000559699 137 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AC017083.3-201ENST00000609955 700 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 HULC.1-201ENST00000612720 240 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 AC098657.3-201ENST00000620434 263 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 OR5AK4P-201ENST00000635912 903 ntBASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCSER1Q9C0I3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 RNU6-212P-201ENST00000362642 104 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 RNU1-23P-201ENST00000363361 144 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 Y_RNA.517-201ENST00000384551 106 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 MIR29C-201ENST00000385231 88 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AL591034.2-201ENST00000402839 359 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 RNU2-29P-201ENST00000410423 189 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AL353193.1-201ENST00000421444 268 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 PGBD4P6-201ENST00000421501 610 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 C8orf59P1-201ENST00000429930 303 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 HMGB1P31-201ENST00000437242 427 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC007677.1-201ENST00000445757 515 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AP001025.1-201ENST00000486139 332 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC018868.1-201ENST00000491307 315 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 HMGB1P35-201ENST00000503360 598 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AP000763.2-201ENST00000540641 163 ntBASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.05□□□□□ -2.08
CCSER1Q9C0I3 AC007375.1-201ENST00000554513 578 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms