Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC027575.1-201ENST00000481064 460 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 AC093852.1-201ENST00000503587 266 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 SNORA43.2-201ENST00000516652 128 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 RPL21P5-201ENST00000554662 472 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 AL137100.2-201ENST00000555786 315 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 MTCYBP33-201ENST00000575007 1130 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 FAM106DP-201ENST00000586416 501 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 AC008521.1-201ENST00000587471 187 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 DEFB131E-202ENST00000602581 683 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 AC007792.1-201ENST00000623023 402 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 AC093648.1-201ENST00000623546 606 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 AL157786.1-207ENST00000627771 695 ntBASIC1.55□□□□□ -2.16
PCDH11XQ9BZA7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 RNU6-384P-201ENST00000364900 104 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 RNU6-61P-201ENST00000365528 109 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 RNU6-611P-201ENST00000384276 104 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 MIR578-201ENST00000384828 96 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 MIR29C-201ENST00000385231 88 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 VN1R36P-201ENST00000414936 291 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 CALM2P2-201ENST00000428512 440 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 MTND6P13-201ENST00000443510 523 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 AC245102.2-201ENST00000448956 180 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 ZNF114P1-201ENST00000453500 292 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 RPS29P1-201ENST00000465274 159 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 AC006512.1-201ENST00000468816 291 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 Y_RNA.687-201ENST00000516558 91 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 RNU6-667P-201ENST00000517186 102 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 AP001372.4-201ENST00000524889 472 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 AP000763.2-201ENST00000540641 163 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 AC243960.4-201ENST00000600532 288 ntBASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.54□□□□□ -2.16
PCDH11XQ9BZA7 Y_RNA.22-201ENST00000362492 102 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 RNU6-546P-201ENST00000383991 107 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 MIR29B2-201ENST00000385055 81 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 RNU2-48P-201ENST00000410694 191 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 SRIP3-201ENST00000413200 219 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 MTND2P29-201ENST00000438595 412 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 UBE2D3P4-201ENST00000441973 436 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AL360271.2-201ENST00000447710 161 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 EPS15P1-201ENST00000448836 336 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AC005178.1-201ENST00000508392 440 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 MTND1P22-201ENST00000510572 951 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 FABP5P5-201ENST00000515537 406 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 RNU6-1129P-201ENST00000515964 104 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 RNU6-685P-201ENST00000517088 95 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AC022616.3-201ENST00000523940 148 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 BNIP3P6-201ENST00000549284 499 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AC090616.2-202ENST00000584248 222 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AL022161.1-201ENST00000604390 213 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AC091304.9-201ENST00000612091 226 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AL773524.1-201ENST00000614065 229 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AL359314.1-201ENST00000616913 261 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 MIR6515-201ENST00000619843 57 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 AC138649.3-201ENST00000622154 254 ntBASIC1.53□□□□□ -2.16
PCDH11XQ9BZA7 MTND4P4-201ENST00000439033 1366 ntBASIC1.53□□□□□ -2.17
PCDH11XQ9BZA7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
PCDH11XQ9BZA7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.53□□□□□ -2.17
PCDH11XQ9BZA7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 RNU2-32P-201ENST00000411193 191 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 RNA5SP111-201ENST00000411386 101 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 OR9R1P-201ENST00000412200 877 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 EEF1A1P40-201ENST00000412883 573 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 BTF3L4P1-201ENST00000413813 468 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 SNRPEP10-201ENST00000420249 274 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 HSPE1P21-201ENST00000438283 308 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 AC016957.1-201ENST00000534895 309 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 AC018630.3-201ENST00000542637 96 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 MIR151B-201ENST00000584249 96 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 AC083806.3-201ENST00000614016 455 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 RMST_4.1-201ENST00000616886 107 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 RMST_7.1-201ENST00000621935 268 ntBASIC1.52□□□□□ -2.17
PCDH11XQ9BZA7 RNU6-179P-201ENST00000363350 107 ntBASIC1.51□□□□□ -2.17
PCDH11XQ9BZA7 SNORA20.2-201ENST00000383922 131 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms