Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 Y_RNA.112-201ENST00000363250 102 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RNA5SP72-201ENST00000364442 117 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 Y_RNA.463-201ENST00000384271 102 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RNU6-1140P-201ENST00000410517 106 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RNU2-23P-201ENST00000410545 195 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RN7SKP61-201ENST00000410642 295 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RNU4-47P-201ENST00000410876 114 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 AC109925.1-201ENST00000478069 331 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RPL36AP48-201ENST00000485521 314 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RPL22P13-201ENST00000493291 347 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 RN7SKP282-201ENST00000516824 299 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 AC020661.2-201ENST00000560114 134 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 MIR2682-201ENST00000580305 110 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 MIR3171-201ENST00000584270 74 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 AC084757.4-201ENST00000616350 526 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 MIR7975-201ENST00000619350 68 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 AC099654.10-201ENST00000640395 161 ntBASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM54Q9BYV2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC092268.1-201ENST00000342691 405 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 SNORA63.1-201ENST00000362493 131 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 RNU6-595P-201ENST00000363944 107 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 RNU6-1286P-201ENST00000383871 107 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 Y_RNA.428-201ENST00000384078 102 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 RNU6-700P-201ENST00000391043 107 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 U3.26-201ENST00000391236 204 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AL590004.1-201ENST00000405321 300 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC078809.1-201ENST00000427601 140 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 YME1L1P1-201ENST00000429435 297 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC244670.1-201ENST00000436879 112 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC099799.1-201ENST00000439809 192 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 GPM6BP3-201ENST00000442797 145 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 RPS3AP12-201ENST00000443616 753 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AL353705.4-201ENST00000449661 238 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 RN7SKP210-201ENST00000459176 261 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC091874.1-201ENST00000511402 339 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 RNU6-120P-201ENST00000516077 103 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 RNU6-699P-201ENST00000517081 110 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AP003072.1-201ENST00000531740 145 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AL590705.4-201ENST00000532209 134 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC016256.1-201ENST00000547971 354 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 SUB1P3-201ENST00000564581 315 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC011471.1-201ENST00000585766 187 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC060766.3-201ENST00000591442 263 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AC008739.2-201ENST00000597006 317 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 SNRPGP17-201ENST00000603780 214 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 AL109809.4-201ENST00000603520 2185 ntBASIC3.09□□□□□ -1.91
TRIM54Q9BYV2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.09□□□□□ -1.92
TRIM54Q9BYV2 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.92
TRIM54Q9BYV2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
TRIM54Q9BYV2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
TRIM54Q9BYV2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 MTND5P30-201ENST00000452896 1731 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 SNORA71.3-201ENST00000362582 128 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 U3.13-201ENST00000364804 214 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 Y_RNA.577-201ENST00000384794 101 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AL357075.1-201ENST00000404107 726 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AL137792.2-201ENST00000443484 235 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AL035666.1-201ENST00000446195 348 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AC112771.1-201ENST00000463581 102 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 RPL27AP5-201ENST00000469428 449 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 RN7SL601P-201ENST00000471221 293 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 RPL31P41-201ENST00000477967 372 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 SNORD116.3-201ENST00000517176 78 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 MIR4765-201ENST00000585007 77 ntBASIC3.08□□□□□ -1.92
TRIM54Q9BYV2 AC069200.1-201ENST00000609511 323 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms