Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSBP4Q9BWG4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP4Q9BWG4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP4Q9BWG4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP4Q9BWG4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SSBP4Q9BWG4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP4Q9BWG4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP4Q9BWG4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSBP4Q9BWG4 RNU1-20P-201ENST00000363314 162 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.528-201ENST00000384575 108 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.544-201ENST00000384650 113 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 MIR621-201ENST00000384919 96 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 MIR548B-201ENST00000385247 97 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 RNA5SP153-201ENST00000516498 76 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 RNU6-1337P-201ENST00000516525 95 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 AC021739.1-201ENST00000559631 174 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 MIR8080-201ENST00000622224 89 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 AL592437.2-201ENST00000421655 2434 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 FAM35BP-202ENST00000497389 3337 ntBASIC3.65□□□□□ -1.83
SSBP4Q9BWG4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 BRAFP1-201ENST00000445336 2703 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 RNU6-674P-201ENST00000363831 107 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.220-201ENST00000364244 109 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 RNU6-573P-201ENST00000383938 106 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 MIR124-3-201ENST00000384866 87 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 MIR600-201ENST00000385007 98 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 MIR873-201ENST00000401120 77 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 SNORA77-201ENST00000408716 125 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 RPL23AP82-202ENST00000427528 469 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 RPL23AP1-201ENST00000428990 471 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 PSMD10P3-201ENST00000437000 448 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC064862.4-201ENST00000442180 334 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AL354714.3-201ENST00000447284 493 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC109327.2-201ENST00000448339 378 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 RPL23AP7-203ENST00000449021 469 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AL021397.1-201ENST00000451806 248 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 RNA5SP281-201ENST00000516504 135 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC005363.1-201ENST00000530779 351 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC126177.5-201ENST00000549599 178 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 MIR4644-201ENST00000579929 84 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 MIR6071-201ENST00000616741 78 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC112484.5-201ENST00000624189 228 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC007496.3-201ENST00000624987 3443 ntBASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.64□□□□□ -1.83
SSBP4Q9BWG4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 RPL23P2-201ENST00000320371 421 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 Y_RNA.52-201ENST00000362760 96 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 SNORA67.2-201ENST00000384300 149 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 SNORD116-13-201ENST00000384408 92 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 SNORA70.10-201ENST00000384515 134 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 SNORA1.3-201ENST00000384676 136 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 BX323845.1-201ENST00000432417 179 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 RPS29P20-201ENST00000489592 171 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AL592156.1-201ENST00000508758 304 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 RN7SKP43-201ENST00000516173 320 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 RN7SKP12-201ENST00000516275 143 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 RNU6-1146P-201ENST00000516282 102 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AC069240.1-201ENST00000548774 375 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AC005972.2-201ENST00000604690 348 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AC110741.2-201ENST00000605278 268 ntBASIC3.63□□□□□ -1.83
SSBP4Q9BWG4 AL442128.1-201ENST00000615151 90 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms