Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 AL591034.2-201ENST00000402839 359 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 SNORD56-201ENST00000413522 71 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AL590383.1-201ENST00000428602 75 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC105272.1-201ENST00000438604 198 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC073910.1-201ENST00000445047 438 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC009237.8-201ENST00000445492 379 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 HIGD1AP2-201ENST00000446367 280 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 CECR9-201ENST00000453421 199 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 RNU6-1037P-201ENST00000459571 107 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC018437.1-201ENST00000492214 406 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC105758.1-201ENST00000506038 399 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 RNA5SP356-201ENST00000515972 94 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 MIR5696-201ENST00000578474 85 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AL138825.1-201ENST00000618587 192 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
SH2D3AQ9BRG2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 AC007785.2-201ENST00000598627 1916 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 RNU4-42P-201ENST00000364738 142 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 RNU6-851P-201ENST00000384565 107 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 RPL21P1-201ENST00000399532 476 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 RNU2-52P-201ENST00000410680 190 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 AL117339.3-201ENST00000418733 162 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 DPH3P2-201ENST00000422618 250 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 AL353997.1-201ENST00000432936 108 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 CBX3P8-201ENST00000532412 525 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 MIR5188-201ENST00000583467 113 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 AC136601.2-201ENST00000604356 474 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.13□□□□□ -1.91
SH2D3AQ9BRG2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 AL035425.3-201ENST00000564206 4996 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 RNU6-99P-201ENST00000364721 107 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 RNU6-472P-201ENST00000384299 107 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 Y_RNA.518-201ENST00000384552 113 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 MIR493-201ENST00000385254 89 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 SNORA40C-201ENST00000391285 128 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 RNU6-1156P-201ENST00000410365 100 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 RNU6-847P-201ENST00000411115 108 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 EIF4EP2-201ENST00000422816 654 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 RPL23AP50-201ENST00000434149 455 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 Z82210.1-201ENST00000440037 231 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 RPL21P2-201ENST00000440049 481 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 FO393415.2-201ENST00000480085 343 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 AC139453.3-201ENST00000493276 369 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 RNA5SP291-201ENST00000517222 105 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 AC025755.1-201ENST00000521306 278 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 MIR4319-201ENST00000577285 85 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 AL161431.1-201ENST00000618966 4205 ntBASIC3.12□□□□□ -1.91
SH2D3AQ9BRG2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 RNY1P16-201ENST00000363063 111 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 DEFB109C-201ENST00000382575 264 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 DEFB109B-201ENST00000382656 264 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 RNU6-1026P-201ENST00000384465 108 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 AL513475.1-201ENST00000406602 315 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 Y_RNA.623-201ENST00000411128 95 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 AL627311.1-201ENST00000431514 115 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 AC092573.2-201ENST00000434546 243 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 AC244505.4-201ENST00000434905 287 ntBASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.11□□□□□ -1.91
SH2D3AQ9BRG2 SSXP5-201ENST00000443473 287 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms