Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RNU6-1041P-201ENST00000516254 102 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 Y_RNA.687-201ENST00000516558 91 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 AP000907.2-201ENST00000530827 353 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 AL136520.1-202ENST00000555494 763 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.24□□□□□ -2.37
VPS25Q9BRG1 MIR1273C-201ENST00000578669 77 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 MIR5695-201ENST00000579717 85 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 AC007792.1-201ENST00000623023 402 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 MTND5P42-201ENST00000637720 498 ntBASIC0.24□□□□□ -2.37
VPS25Q9BRG1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.24□□□□□ -2.37
VPS25Q9BRG1 RNU4-15P-201ENST00000362613 141 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 Y_RNA.140-201ENST00000363474 103 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 RNU6-1284P-201ENST00000363701 100 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 MIR10A-201ENST00000385043 110 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 RNA5SP390-201ENST00000410191 113 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 Y_RNA.623-201ENST00000411128 95 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 HMGN1P14-201ENST00000412459 517 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AL591704.1-201ENST00000432574 275 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AP000542.1-201ENST00000448473 371 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AL139824.2-201ENST00000458731 1095 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AC092991.1-201ENST00000477176 376 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 MTND2P33-201ENST00000506452 1031 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 RNU6-922P-201ENST00000516753 99 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AP003355.1-201ENST00000518956 587 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 DEFB131D-201ENST00000526803 184 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AC021231.3-201ENST00000558497 370 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 MIR4742-201ENST00000581069 85 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 MIR3136-201ENST00000583498 78 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AC091135.1-201ENST00000585943 307 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 KC877982.1-201ENST00000602313 470 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AC005858.4-201ENST00000623191 700 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 AC241585.2-209ENST00000638217 143 ntBASIC0.23□□□□□ -2.37
VPS25Q9BRG1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
VPS25Q9BRG1 SNORA33-201ENST00000363664 130 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 U3.8-201ENST00000363675 217 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 SMIM11P1-201ENST00000369586 178 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 UBE2V1P15-201ENST00000407776 448 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 RNU6-1054P-201ENST00000411293 104 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 ARL5AP1-201ENST00000418991 388 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.22□□□□□ -2.37
VPS25Q9BRG1 RPL23AP95-201ENST00000426806 265 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 MTCO3P29-201ENST00000432119 779 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AL591806.2-201ENST00000433122 173 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AL158053.1-201ENST00000441503 453 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 TOMM22P6-201ENST00000465035 409 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AL163540.1-201ENST00000485382 386 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.22□□□□□ -2.37
VPS25Q9BRG1 SUMO2P5-201ENST00000506790 245 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AF131216.2-201ENST00000512316 564 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 CYP4A27P-201ENST00000567218 190 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AC098848.2-201ENST00000588023 330 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AC090186.1-201ENST00000605991 572 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 MIR15A-201ENST00000607334 83 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 AC124016.2-201ENST00000610058 665 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 PCMTD1P7-201ENST00000634506 357 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 MIR5087-201ENST00000635826 76 ntBASIC0.22□□□□□ -2.37
VPS25Q9BRG1 RNA5SP126-201ENST00000365092 109 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 SNORA11-201ENST00000408789 128 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC092423.1-201ENST00000430165 186 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC245047.7-201ENST00000440265 293 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AL031313.1-201ENST00000448435 256 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC108059.3-201ENST00000456388 214 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 RPL39P38-201ENST00000467018 153 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC108078.2-201ENST00000510750 236 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC119751.5-201ENST00000514077 770 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 SNORA68.3-201ENST00000515906 83 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 SNORA43.2-201ENST00000516652 128 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC011979.2-201ENST00000527568 352 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC080078.2-201ENST00000603766 501 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC016727.2-201ENST00000603988 621 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC093913.1-201ENST00000614178 329 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 AC104985.3-201ENST00000623479 597 ntBASIC0.21□□□□□ -2.38
VPS25Q9BRG1 SNORA32.2-201ENST00000384049 122 ntBASIC0.2□□□□□ -2.38
VPS25Q9BRG1 RPS3AP36-201ENST00000398190 775 ntBASIC0.2□□□□□ -2.38
VPS25Q9BRG1 MIR1305-201ENST00000408300 86 ntBASIC0.2□□□□□ -2.38
VPS25Q9BRG1 AL359704.1-201ENST00000411586 781 ntBASIC0.2□□□□□ -2.38
VPS25Q9BRG1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.2□□□□□ -2.38
VPS25Q9BRG1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.2□□□□□ -2.38
VPS25Q9BRG1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.2□□□□□ -2.38
VPS25Q9BRG1 AC093899.1-201ENST00000457984 376 ntBASIC0.2□□□□□ -2.38
VPS25Q9BRG1 RNU6-953P-201ENST00000459154 107 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms