Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CETN4P-201ENST00000432407 469 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC092427.1-201ENST00000439177 601 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 RPS27AP8-201ENST00000452665 445 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.3□□□□□ -2.36
IFT140Q96RY7 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC067940.1-201ENST00000458411 300 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.3□□□□□ -2.36
IFT140Q96RY7 RNU6-714P-201ENST00000516963 103 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC012414.2-201ENST00000559474 187 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC137800.2-201ENST00000574375 120 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC022432.1-201ENST00000595739 310 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC068790.6-201ENST00000602558 258 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 BNIP3P31-201ENST00000604515 566 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AL158032.1-201ENST00000605401 106 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC104465.1-201ENST00000611365 139 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 AC008759.3-201ENST00000613300 508 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 RNU6-858P-201ENST00000362436 107 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 SNORD56.4-201ENST00000363883 71 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 RNU6-188P-201ENST00000364207 107 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 RNU4-12P-201ENST00000365233 139 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 SUGT1P1-201ENST00000379514 476 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 RNU6-432P-201ENST00000384196 109 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 GTF2IP13-201ENST00000438487 386 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 AC012308.1-201ENST00000451232 178 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 AC097473.1-201ENST00000508142 408 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 RNA5SP168-201ENST00000516642 112 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 SCARNA1-201ENST00000517138 166 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 DPPA3P3-201ENST00000603842 430 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 AC105129.3-201ENST00000605455 485 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 SNORD51.1-201ENST00000365405 77 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 RNU6-359P-201ENST00000365466 108 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 RNU6-110P-201ENST00000384508 104 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 RNU6-575P-201ENST00000411326 105 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 MTCO3P45-201ENST00000443036 613 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 MTCO2P25-201ENST00000447065 681 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 AC093809.1-201ENST00000509155 340 ntBASIC0.29□□□□□ -2.36
IFT140Q96RY7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.29□□□□□ -2.36
IFT140Q96RY7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
IFT140Q96RY7 MIR29B2-201ENST00000385055 81 ntBASIC0.28□□□□□ -2.37
IFT140Q96RY7 CBX3P9-201ENST00000402326 552 ntBASIC0.28□□□□□ -2.37
IFT140Q96RY7 AL022718.1-201ENST00000412004 84 ntBASIC0.28□□□□□ -2.37
IFT140Q96RY7 AC104651.1-201ENST00000427559 735 ntBASIC0.28□□□□□ -2.37
IFT140Q96RY7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.28□□□□□ -2.37
IFT140Q96RY7 RNA5SP481-201ENST00000516814 122 ntBASIC0.28□□□□□ -2.37
IFT140Q96RY7 RNA5SP437-201ENST00000517249 129 ntBASIC0.28□□□□□ -2.37
IFT140Q96RY7 AP001981.2-201ENST00000603241 418 ntBASIC0.28□□□□□ -2.37
IFT140Q96RY7 MIR1322-201ENST00000638013 71 ntBASIC0.28□□□□□ -2.37
IFT140Q96RY7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
IFT140Q96RY7 Y_RNA.124-201ENST00000363339 93 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 RNU6-97P-201ENST00000363387 104 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 RNU6-114P-201ENST00000384704 105 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 RNU6-331P-201ENST00000384724 107 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC063976.4-201ENST00000421971 163 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 TXNL1P1-201ENST00000429528 554 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.27□□□□□ -2.37
IFT140Q96RY7 AL358794.1-201ENST00000445689 381 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC010631.1-201ENST00000474150 156 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 MTCO3P42-201ENST00000509488 518 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 MTCO3P39-201ENST00000514812 518 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 RNU6-572P-201ENST00000516724 80 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC093012.1-202ENST00000549403 582 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.27□□□□□ -2.37
IFT140Q96RY7 AL590229.1-201ENST00000603497 542 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC107304.1-201ENST00000604229 296 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC130324.3-201ENST00000614165 542 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 LINC02555-201ENST00000563933 1951 ntBASIC0.27□□□□□ -2.37
IFT140Q96RY7 AC010615.1-201ENST00000594254 1764 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 RNU6-1210P-201ENST00000363775 107 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 MIR200A-201ENST00000384875 90 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 MIR194-1-201ENST00000384892 85 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 Y_RNA.597-201ENST00000410463 100 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 TPMTP2-201ENST00000414372 726 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 AC002429.1-201ENST00000437672 148 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 COX7BP2-201ENST00000437976 242 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 AC104629.1-201ENST00000494226 508 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.26□□□□□ -2.37
IFT140Q96RY7 AC087897.1-201ENST00000550134 156 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 FAM157A-202ENST00000615155 405 ntBASIC0.26□□□□□ -2.37
IFT140Q96RY7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
IFT140Q96RY7 RNU6-910P-201ENST00000390844 107 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.25□□□□□ -2.37
IFT140Q96RY7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.25□□□□□ -2.37
IFT140Q96RY7 AC099677.2-201ENST00000436385 175 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms