Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL21A1Q96P44 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 Vault.3-201ENST00000516676 95 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 OR5AL2P-201ENST00000532185 920 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 AL356057.1-201ENST00000533798 831 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.56□□□□□ -2.16
COL21A1Q96P44 VN1R80P-201ENST00000597126 338 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 RMST_6.1-201ENST00000611980 203 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 AC022202.1-201ENST00000613515 211 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 AL159153.1-201ENST00000619688 317 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 RMST_7.1-201ENST00000621935 268 ntBASIC1.56□□□□□ -2.16
COL21A1Q96P44 Y_RNA.22-201ENST00000362492 102 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 RNA5SP276-201ENST00000362580 94 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 RNU6-212P-201ENST00000362642 104 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 SNORD14D-201ENST00000384390 87 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 RNU2-48P-201ENST00000410694 191 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 HMGB1P31-201ENST00000437242 427 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 MTND2P33-201ENST00000506452 1031 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC104136.1-201ENST00000512969 394 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC115990.1-201ENST00000526957 301 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 CYCSP27-201ENST00000527643 293 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 BNIP3P6-201ENST00000549284 499 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC010620.1-201ENST00000601088 1102 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.55□□□□□ -2.16
COL21A1Q96P44 AL590229.1-201ENST00000603497 542 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC073114.1-201ENST00000612027 490 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AC091304.9-201ENST00000612091 226 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 AL132822.1-201ENST00000617063 513 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 uc_338.11-201ENST00000619132 160 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 ELL2P3-201ENST00000457883 1602 ntBASIC1.55□□□□□ -2.16
COL21A1Q96P44 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COL21A1Q96P44 U3.4-201ENST00000363352 213 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 RNU5E-7P-201ENST00000365290 117 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 SNORA8-201ENST00000384574 139 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 RPL21P90-201ENST00000415692 466 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AL590556.1-201ENST00000423231 483 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC073614.1-201ENST00000438690 650 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AL163540.1-201ENST00000485382 386 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC093534.1-201ENST00000504977 132 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 MTCYBP40-201ENST00000509390 1135 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
COL21A1Q96P44 TRMT112P2-201ENST00000512910 132 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.54□□□□□ -2.16
COL21A1Q96P44 RNU6-410P-201ENST00000517006 107 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.54□□□□□ -2.16
COL21A1Q96P44 AP003392.2-201ENST00000527269 208 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AP005435.4-201ENST00000529514 284 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC022880.1-201ENST00000534017 973 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.54□□□□□ -2.16
COL21A1Q96P44 HSBP1P1-201ENST00000555205 166 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AP005136.1-201ENST00000579765 429 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 MIR3683-201ENST00000580847 82 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC005771.1-201ENST00000585581 349 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AC091135.1-201ENST00000585943 307 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 AL078605.1-201ENST00000603529 500 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 Z94722.1-201ENST00000604328 474 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.54□□□□□ -2.16
COL21A1Q96P44 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
COL21A1Q96P44 Y_RNA.224-201ENST00000364308 111 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 SNORD116-1-201ENST00000384335 95 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 RNU6-1222P-201ENST00000384615 107 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 RNU6-607P-201ENST00000411283 108 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 UBE2V1P4-201ENST00000425374 344 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.53□□□□□ -2.16
COL21A1Q96P44 AL591043.1-201ENST00000432461 424 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 Z83846.1-201ENST00000446798 265 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 PRELID3BP1-201ENST00000457142 540 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 AC005840.1-201ENST00000498412 377 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 PTP4A1P4-201ENST00000512479 322 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.53□□□□□ -2.16
COL21A1Q96P44 AP005639.2-201ENST00000527592 928 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 AC087883.1-201ENST00000551882 391 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 Z69908.1-201ENST00000622603 247 ntBASIC1.53□□□□□ -2.16
COL21A1Q96P44 RNU6-78P-201ENST00000362897 107 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms