Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 RNU6-1037P-201ENST00000459571 107 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RNU6-1046P-201ENST00000516538 107 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RNU6-928P-201ENST00000516876 104 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AC008121.1-201ENST00000603244 268 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AC005046.1-201ENST00000608515 625 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AC004832.5-201ENST00000608677 401 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 AL161629.2-201ENST00000615347 275 ntBASIC3.14□□□□□ -1.91
CCDC17Q96LX7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC17Q96LX7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 RNU6-490P-201ENST00000362985 107 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 RNA5SP68-201ENST00000363885 119 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 RNU6-884P-201ENST00000363889 107 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 U8.8-201ENST00000365399 135 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 RNU6-639P-201ENST00000384074 107 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 RNU6-1032P-201ENST00000384100 107 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 AC098831.1-201ENST00000440661 216 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 SSXP4-201ENST00000451349 245 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 AC013470.1-201ENST00000453438 462 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 RPS3P1-201ENST00000456781 192 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 RPS26P21-201ENST00000475397 348 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 HMGN2P13-201ENST00000476476 274 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 FO393415.2-201ENST00000480085 343 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 AC109446.1-201ENST00000566172 220 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 BNIP3P16-201ENST00000589779 534 ntBASIC3.13□□□□□ -1.91
CCDC17Q96LX7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CCDC17Q96LX7 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 Y_RNA.145-201ENST00000363527 102 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 RNU6-596P-201ENST00000365395 98 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 RNU6-72P-201ENST00000384285 79 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 SNORA41-201ENST00000384675 132 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 MIR518D-201ENST00000385014 87 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AL512633.1-201ENST00000399931 655 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 MRPS18CP6-201ENST00000423587 223 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC008267.5-201ENST00000424928 265 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC068781.1-201ENST00000488231 618 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 RPS29P20-201ENST00000489592 171 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC022447.4-201ENST00000504053 364 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 Y_RNA.661-201ENST00000516003 99 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC136443.5-201ENST00000603741 370 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 AC083806.3-201ENST00000614016 455 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 MIR6817-201ENST00000615588 66 ntBASIC3.12□□□□□ -1.91
CCDC17Q96LX7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC17Q96LX7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 Y_RNA.80-201ENST00000362996 102 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 Y_RNA.485-201ENST00000384395 102 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 RNU6-658P-201ENST00000384606 106 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 AL513475.1-201ENST00000406602 315 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 AC011816.1-201ENST00000441346 546 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 RNA5SP310-201ENST00000459084 116 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 CBX3P8-201ENST00000532412 525 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 LINC00933-203ENST00000559812 219 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 MIR4782-201ENST00000577987 79 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 AC009314.1-201ENST00000603871 304 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 AP000787.2-201ENST00000604432 568 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 AC006157.1-201ENST00000611750 366 ntBASIC3.11□□□□□ -1.91
CCDC17Q96LX7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC17Q96LX7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC17Q96LX7 RNU4-82P-201ENST00000362443 140 ntBASIC3.1□□□□□ -1.91
CCDC17Q96LX7 RNU6-898P-201ENST00000365627 104 ntBASIC3.1□□□□□ -1.91
CCDC17Q96LX7 RNU1-73P-201ENST00000383971 164 ntBASIC3.1□□□□□ -1.91
CCDC17Q96LX7 Y_RNA.459-201ENST00000384251 102 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms