Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 Y_RNA.101-201ENST00000363154 102 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 Y_RNA.180-201ENST00000363867 113 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 Y_RNA.292-201ENST00000364904 97 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CALR3Q96L12 U1.1-201ENST00000384101 164 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 RNA5SP475-201ENST00000410568 110 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 AC027124.2-201ENST00000428249 105 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.48□□□□□ -1.69
CALR3Q96L12 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.48□□□□□ -1.69
CALR3Q96L12 AC091179.1-201ENST00000461606 579 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 RN7SL177P-201ENST00000476596 299 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 RN7SL132P-201ENST00000478131 296 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 AC006445.1-201ENST00000491925 405 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.48□□□□□ -1.69
CALR3Q96L12 RNU6-344P-201ENST00000516635 111 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.48□□□□□ -1.69
CALR3Q96L12 RPL21P9-201ENST00000556149 474 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 AL512605.2-201ENST00000592972 256 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 MIR3674-201ENST00000636576 68 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CALR3Q96L12 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
CALR3Q96L12 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.48□□□□□ -1.69
CALR3Q96L12 AC092593.1-201ENST00000515413 1815 ntBASIC4.48□□□□□ -1.69
CALR3Q96L12 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CALR3Q96L12 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.48□□□□□ -1.69
CALR3Q96L12 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.48□□□□□ -1.69
CALR3Q96L12 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CALR3Q96L12 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.47□□□□□ -1.69
CALR3Q96L12 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CALR3Q96L12 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.82-201ENST00000363000 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.92-201ENST00000363043 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.150-201ENST00000363562 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.235-201ENST00000364412 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.306-201ENST00000365015 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.312-201ENST00000365089 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.322-201ENST00000365151 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 RNY4P28-201ENST00000365281 93 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 SNORA3C-201ENST00000408792 125 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.626-201ENST00000411288 95 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 AL157831.1-201ENST00000426134 473 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 AC004386.2-201ENST00000441858 148 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.650-201ENST00000459002 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 RN7SL810P-201ENST00000493031 276 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.777-201ENST00000516982 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 CBX3P4-201ENST00000538909 354 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 TGIF1P1-201ENST00000558095 802 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 AC044860.2-201ENST00000561005 179 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 AL360157.1-201ENST00000565962 87 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.47□□□□□ -1.69
CALR3Q96L12 MIR4282-201ENST00000583613 67 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 AC011471.1-201ENST00000585766 187 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.771-201ENST00000598668 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 Y_RNA.789-201ENST00000622480 102 ntBASIC4.47□□□□□ -1.69
CALR3Q96L12 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CALR3Q96L12 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.47□□□□□ -1.69
CALR3Q96L12 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CALR3Q96L12 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CALR3Q96L12 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CALR3Q96L12 ZNF962P-201ENST00000443465 3140 ntBASIC4.46□□□□□ -1.69
CALR3Q96L12 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
CALR3Q96L12 AL359854.1-201ENST00000614203 1594 ntBASIC4.46□□□□□ -1.7
CALR3Q96L12 Y_RNA.415-201ENST00000384012 112 ntBASIC4.46□□□□□ -1.7
CALR3Q96L12 AC097463.2-201ENST00000421074 142 ntBASIC4.46□□□□□ -1.7
CALR3Q96L12 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.46□□□□□ -1.7
CALR3Q96L12 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.46□□□□□ -1.7
CALR3Q96L12 RPS27P26-201ENST00000494583 239 ntBASIC4.46□□□□□ -1.7
CALR3Q96L12 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.46□□□□□ -1.7
CALR3Q96L12 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.46□□□□□ -1.7
CALR3Q96L12 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.46□□□□□ -1.7
CALR3Q96L12 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.46□□□□□ -1.7
CALR3Q96L12 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.46□□□□□ -1.7
CALR3Q96L12 Z83818.1-201ENST00000603584 150 ntBASIC4.46□□□□□ -1.7
CALR3Q96L12 AC024940.4-201ENST00000605507 246 ntBASIC4.46□□□□□ -1.7
CALR3Q96L12 SNORD11B-201ENST00000607707 90 ntBASIC4.46□□□□□ -1.7
CALR3Q96L12 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CALR3Q96L12 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CALR3Q96L12 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.46□□□□□ -1.7
CALR3Q96L12 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CALR3Q96L12 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.46□□□□□ -1.7
CALR3Q96L12 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CALR3Q96L12 MIR331-201ENST00000362302 94 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 RNU2-54P-201ENST00000410299 190 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 RNU6-651P-201ENST00000411040 105 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 ELOCP19-201ENST00000411919 318 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 Z98742.2-201ENST00000431564 187 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.45□□□□□ -1.7
CALR3Q96L12 AL358232.1-201ENST00000448030 501 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 RPS23P1-201ENST00000491662 432 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.45□□□□□ -1.7
CALR3Q96L12 SNORD116-28-201ENST00000516123 91 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 RNU6-155P-201ENST00000516347 100 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 IGKV2-38-201ENST00000517443 247 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 AC024405.2-202ENST00000532731 184 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 MIR5006-201ENST00000583027 110 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.45□□□□□ -1.7
CALR3Q96L12 IPO5P1-202ENST00000600039 287 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 CR392039.5-201ENST00000623201 510 ntBASIC4.45□□□□□ -1.7
CALR3Q96L12 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CALR3Q96L12 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms