Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 RPS15AP7-201ENST00000439294 405 ntBASIC3.82□□□□□ -1.8
SHDQ96IW2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.82□□□□□ -1.8
SHDQ96IW2 U3.44-201ENST00000458938 192 ntBASIC3.82□□□□□ -1.8
SHDQ96IW2 RN7SL585P-201ENST00000470538 280 ntBASIC3.82□□□□□ -1.8
SHDQ96IW2 BTF3L4P4-201ENST00000506381 449 ntBASIC3.82□□□□□ -1.8
SHDQ96IW2 RNA5SP54-201ENST00000516951 92 ntBASIC3.82□□□□□ -1.8
SHDQ96IW2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
SHDQ96IW2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.82□□□□□ -1.8
SHDQ96IW2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.82□□□□□ -1.8
SHDQ96IW2 AC107871.2-201ENST00000612894 502 ntBASIC3.82□□□□□ -1.8
SHDQ96IW2 MIR8058-201ENST00000615737 89 ntBASIC3.82□□□□□ -1.8
SHDQ96IW2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SHDQ96IW2 RNU6-1301P-201ENST00000362724 104 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.81□□□□□ -1.8
SHDQ96IW2 SNORA36A-201ENST00000384221 132 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 Y_RNA.476-201ENST00000384347 108 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AL133475.1-201ENST00000404414 305 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 RNA5SP120-201ENST00000410900 112 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 RPS26P42-201ENST00000413485 326 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AL365496.1-201ENST00000426885 215 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 BX679664.1-201ENST00000434429 253 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.81□□□□□ -1.8
SHDQ96IW2 U8.22-201ENST00000459141 133 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AIG1P1-201ENST00000503376 148 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AC017037.1-201ENST00000508460 471 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 RNU6-1271P-201ENST00000517049 105 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 IGKV2-38-201ENST00000517443 247 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.81□□□□□ -1.8
SHDQ96IW2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.81□□□□□ -1.8
SHDQ96IW2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.81□□□□□ -1.8
SHDQ96IW2 MIR4513-201ENST00000581077 86 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AC078899.3-201ENST00000599065 212 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AC062037.2-201ENST00000610137 73 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 uc_338.14-201ENST00000613162 166 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 AC005296.1-201ENST00000616145 209 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHDQ96IW2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.81□□□□□ -1.8
SHDQ96IW2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHDQ96IW2 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
SHDQ96IW2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.8□□□□□ -1.8
SHDQ96IW2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SHDQ96IW2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHDQ96IW2 RNU6-280P-201ENST00000364145 104 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 U8.10-201ENST00000384260 133 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 MIR490-201ENST00000384865 128 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 SNORA48.2-201ENST00000390926 124 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 AC017083.1-201ENST00000428093 483 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 EIF1P2-201ENST00000428233 350 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 CBX3P6-201ENST00000430257 527 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 AC090525.1-201ENST00000479116 478 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 AC010469.2-201ENST00000496412 480 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 Y_RNA.668-201ENST00000516233 93 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 SNORD59.2-201ENST00000516873 68 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.8□□□□□ -1.8
SHDQ96IW2 GNRHR2P1-201ENST00000555315 631 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 AC110741.2-201ENST00000605278 268 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 SNORD98-201ENST00000636377 67 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 AL450472.1-202ENST00000637286 180 ntBASIC3.8□□□□□ -1.8
SHDQ96IW2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHDQ96IW2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHDQ96IW2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHDQ96IW2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.79□□□□□ -1.8
SHDQ96IW2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHDQ96IW2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SHDQ96IW2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.79□□□□□ -1.8
SHDQ96IW2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHDQ96IW2 SNORD115-8-201ENST00000363856 82 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 RNU1-33P-201ENST00000364249 162 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 SNORD115-38-201ENST00000365037 82 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 RNA5SP39-201ENST00000411245 120 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 AC004383.1-201ENST00000438135 289 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.79□□□□□ -1.8
SHDQ96IW2 RN7SL283P-201ENST00000489055 303 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 RNU6-58P-201ENST00000517143 103 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.79□□□□□ -1.8
SHDQ96IW2 AP003733.2-201ENST00000529409 171 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 AC027288.2-201ENST00000553028 243 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 CYP4A27P-201ENST00000567218 190 ntBASIC3.79□□□□□ -1.8
SHDQ96IW2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
SHDQ96IW2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHDQ96IW2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
SHDQ96IW2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHDQ96IW2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHDQ96IW2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHDQ96IW2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.78□□□□□ -1.8
SHDQ96IW2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.78□□□□□ -1.8
SHDQ96IW2 SNORD9-201ENST00000362566 104 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 Y_RNA.64-201ENST00000362845 102 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 SNORD74.4-201ENST00000364129 80 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 MIR591-201ENST00000385290 95 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 RNA5SP424-201ENST00000390988 115 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 RNU6-159P-201ENST00000391080 106 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 MIR320B2-201ENST00000408479 138 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 RNU6-1140P-201ENST00000410517 106 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 HLA-N-201ENST00000437516 135 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 AC096638.1-201ENST00000444678 216 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 snoU13.6-201ENST00000458785 104 ntBASIC3.78□□□□□ -1.8
SHDQ96IW2 RNU6-1012P-201ENST00000516606 109 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 1646.5 ms