Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC007000.2-201ENST00000442564 487 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 MRPL42P4-201ENST00000453267 443 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC244505.3-201ENST00000454598 187 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AL353752.1-201ENST00000454946 260 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 PRELID3BP1-201ENST00000457142 540 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AL441985.1-201ENST00000457727 251 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC114982.1-201ENST00000469402 321 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC008628.1-201ENST00000508663 265 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC018659.1-201ENST00000551083 169 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC009712.1-201ENST00000564938 316 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC093249.1-201ENST00000567049 203 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AP001033.2-201ENST00000609701 1003 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TTC28Q96AY4 MIR8065-201ENST00000620577 100 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC009268.2-201ENST00000621925 457 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 AC019226.1-201ENST00000625666 515 ntBASIC0.37□□□□□ -2.35
TTC28Q96AY4 MTND5P18-201ENST00000445624 1801 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC138393.1-203ENST00000327086 343 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 MIR101-1-201ENST00000362265 75 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 Y_RNA.186-201ENST00000363899 92 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 SNORD1A-201ENST00000364968 72 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 MIR29B2-201ENST00000385055 81 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC119751.3-201ENST00000399720 670 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC019178.2-201ENST00000423595 505 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC067940.1-201ENST00000458411 300 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 IGKV1-22-201ENST00000524313 326 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC019288.1-201ENST00000557918 224 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC136619.2-201ENST00000563361 631 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 MIR4782-201ENST00000577987 79 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 BNIP3P27-201ENST00000599991 412 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 HSPE1P19-201ENST00000603327 295 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AL583856.2-201ENST00000606298 543 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC100814.1-201ENST00000606963 623 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 HSBP1P2-201ENST00000299671 229 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 MIR302D-201ENST00000362275 68 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 Y_RNA.135-201ENST00000363439 95 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 MIR608-201ENST00000384820 100 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 RNU6-796P-201ENST00000391086 107 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 RNU6-575P-201ENST00000411326 105 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 PIGFP2-201ENST00000421400 651 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC013267.1-201ENST00000458227 267 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AL133373.1-201ENST00000497098 94 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 RNU6-586P-201ENST00000517265 104 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.36□□□□□ -2.35
TTC28Q96AY4 AL355598.1-201ENST00000604169 202 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC098614.4-201ENST00000607601 462 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 AC009237.15-201ENST00000610252 501 ntBASIC0.36□□□□□ -2.35
TTC28Q96AY4 MIR424-201ENST00000362227 98 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 MIR26B-201ENST00000362251 77 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 Y_RNA.121-201ENST00000363309 113 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNU6-546P-201ENST00000383991 107 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 MIR217-201ENST00000384817 110 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNU2-42P-201ENST00000410697 113 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNA5SP100-201ENST00000410903 110 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNA5SP59-201ENST00000410922 110 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.35□□□□□ -2.35
TTC28Q96AY4 AL606490.4-201ENST00000423117 127 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AC008267.5-201ENST00000424928 265 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 UBE2V1P4-201ENST00000425374 344 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 HSPE1P13-201ENST00000451143 297 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.35□□□□□ -2.35
TTC28Q96AY4 AC116655.1-201ENST00000508324 901 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNU7-40P-201ENST00000516397 64 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNU6-551P-201ENST00000516661 103 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AC022861.1-201ENST00000522981 663 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.35□□□□□ -2.35
TTC28Q96AY4 SNORA77B-201ENST00000578179 125 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.35□□□□□ -2.35
TTC28Q96AY4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TTC28Q96AY4 AL355802.4-201ENST00000607635 548 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 uc_338.15-201ENST00000615470 191 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNU6-481P-201ENST00000384194 107 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 MIR597-201ENST00000384968 97 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 MIR506-201ENST00000384998 124 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RNU4-27P-201ENST00000410889 139 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 MTCYBP38-201ENST00000417160 1123 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms