Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.22□□□□□ -2.44
CFAP43Q8NDM7 HMGB1P33-201ENST00000563485 527 ntBASIC-0.22□□□□□ -2.44
CFAP43Q8NDM7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.22□□□□□ -2.44
CFAP43Q8NDM7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
CFAP43Q8NDM7 SNORD114-19-201ENST00000363072 75 ntBASIC-0.23□□□□□ -2.45
CFAP43Q8NDM7 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.23□□□□□ -2.45
CFAP43Q8NDM7 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.23□□□□□ -2.45
CFAP43Q8NDM7 RNU6-950P-201ENST00000384651 107 ntBASIC-0.23□□□□□ -2.45
CFAP43Q8NDM7 AC010385.1-201ENST00000412374 256 ntBASIC-0.23□□□□□ -2.45
CFAP43Q8NDM7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.23□□□□□ -2.45
CFAP43Q8NDM7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.23□□□□□ -2.45
CFAP43Q8NDM7 MIR520A-201ENST00000384862 85 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 RAB28P5-201ENST00000427490 651 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 snoU13.25-201ENST00000458945 104 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 RNU6-333P-201ENST00000459117 107 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 U7.7-201ENST00000459276 60 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 RPS26P48-201ENST00000491713 339 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC016256.1-201ENST00000547971 354 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC017104.5-201ENST00000637647 639 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 RNU4-79P-201ENST00000362764 141 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 RNU6-921P-201ENST00000384361 107 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 RNA5SP451-201ENST00000410588 110 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC079140.3-201ENST00000511111 550 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC004217.3-201ENST00000551552 878 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 SNRPGP20-201ENST00000604477 205 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 RNU4-5P-201ENST00000607255 135 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 AC009032.1-201ENST00000617574 431 ntBASIC-0.24□□□□□ -2.45
CFAP43Q8NDM7 SNORA80D-201ENST00000384488 135 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 AL359704.1-201ENST00000411586 781 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 AL035398.1-201ENST00000430869 322 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 AC245047.7-201ENST00000440265 293 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 MTND2P4-201ENST00000445034 1004 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 AC068135.1-201ENST00000446164 246 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 MTCO2P25-201ENST00000447065 681 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 RNU6-202P-201ENST00000515998 96 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 MIR4290-201ENST00000583807 95 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 AP002906.1-201ENST00000603405 233 ntBASIC-0.25□□□□□ -2.45
CFAP43Q8NDM7 MIRLET7D-201ENST00000362263 87 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 SNORA32.1-201ENST00000364514 115 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 RNA5SP219-201ENST00000390940 113 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 RNU2-33P-201ENST00000410344 192 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 AC007435.1-201ENST00000421086 415 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 AL162395.1-201ENST00000457882 422 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 AC130509.1-201ENST00000464158 433 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 MTND1P22-201ENST00000510572 951 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 RN7SKP12-201ENST00000516275 143 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 RNA5SP290-201ENST00000517133 127 ntBASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.26□□□□□ -2.45
CFAP43Q8NDM7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 RNY4P24-201ENST00000362735 96 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 RNU6-23P-201ENST00000363283 107 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 RNU6-969P-201ENST00000383900 105 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AL353621.1-201ENST00000418219 243 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 RAC1P8-201ENST00000427086 527 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AC092685.1-201ENST00000447960 1243 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 MTCO3P2-201ENST00000457365 171 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AC107304.1-201ENST00000604229 296 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AC034229.4-201ENST00000607861 441 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AC130324.3-201ENST00000614165 542 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 RMST_4.1-201ENST00000616886 107 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AL590240.4-201ENST00000616908 390 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AL078595.3-201ENST00000623815 1166 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 MIR4275-201ENST00000636486 87 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 RNY3P5-201ENST00000384127 102 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AC126365.2-201ENST00000580630 379 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AL353997.4-201ENST00000586196 166 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 RNU6-87P-201ENST00000607561 108 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 AC021506.2-201ENST00000612354 169 ntBASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
CFAP43Q8NDM7 MTND5P16-201ENST00000460269 1703 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 RNU4-9P-201ENST00000364951 139 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 MIR601-201ENST00000385256 79 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 RPL22P18-201ENST00000417197 377 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 AC005094.1-201ENST00000440420 368 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 AC015724.1-201ENST00000478577 156 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 RNU6-965P-201ENST00000516721 96 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 AC012065.4-201ENST00000602445 679 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 MIR1295B-201ENST00000636144 60 ntBASIC-0.28□□□□□ -2.45
CFAP43Q8NDM7 RNU6-72P-201ENST00000384285 79 ntBASIC-0.29□□□□□ -2.46
CFAP43Q8NDM7 TAF13P2-201ENST00000416876 286 ntBASIC-0.29□□□□□ -2.46
CFAP43Q8NDM7 AC244098.3-201ENST00000424803 96 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms