Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 RNU4-73P-201ENST00000363164 141 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-142P-201ENST00000384019 107 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 RNU1-57P-201ENST00000384491 166 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 AC078809.1-201ENST00000427601 140 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 RPL30P4-201ENST00000429309 333 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 AL139132.1-201ENST00000431587 344 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 RPS12P18-201ENST00000442381 270 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 AC117440.1-201ENST00000474107 571 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 RPL30P12-201ENST00000474666 353 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 AC016632.1-201ENST00000503994 196 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 RNU1-143P-201ENST00000516296 146 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 Y_RNA.675-201ENST00000516389 149 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 AC027176.1-201ENST00000560204 514 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 MIR3976-201ENST00000606807 139 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 U1.23-201ENST00000610293 146 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 RNU1-68P-201ENST00000615382 146 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 U1.39-201ENST00000621562 146 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 AL161431.1-201ENST00000618966 4205 ntBASIC3.49□□□□□ -1.85
PRPF38AQ8NAV1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-212P-201ENST00000362642 104 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-43P-201ENST00000384302 107 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-851P-201ENST00000384565 107 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 MIR218-1-201ENST00000384999 110 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AL591034.2-201ENST00000402839 359 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 RN7SKP61-201ENST00000410642 295 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 RPL23AP95-201ENST00000426806 265 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AC236972.1-201ENST00000433225 199 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 snoU13.14-201ENST00000459372 104 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 RN7SL75P-201ENST00000461926 281 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 RPS29P27-201ENST00000463711 170 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AC083906.5-201ENST00000503722 328 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-307P-201ENST00000516743 106 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 SCARNA3-201ENST00000517097 143 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AC016256.1-201ENST00000547971 354 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 MIR4273-201ENST00000582824 84 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 MIR3616-201ENST00000584070 92 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AC133104.2-201ENST00000615272 193 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AL359697.1-201ENST00000624879 587 ntBASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PRPF38AQ8NAV1 AC073325.2-201ENST00000339545 159 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 AC092268.1-201ENST00000342691 405 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 U3.6-201ENST00000363622 211 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 SNORD32A-201ENST00000364805 84 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 MTCYBP4-201ENST00000401524 249 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-1050P-201ENST00000410388 107 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 RNU6-370P-201ENST00000411008 104 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 MTCO2P27-201ENST00000420740 428 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 EIF4EP2-201ENST00000422816 654 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 BX276092.3-201ENST00000424182 230 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 Z82205.1-201ENST00000428456 297 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 RPS29P26-201ENST00000477483 171 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 AC026782.1-201ENST00000512952 449 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 RNA5SP217-201ENST00000515959 91 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 HSPE1P4-201ENST00000550617 308 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 AC007375.1-201ENST00000554513 578 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 AL627309.6-201ENST00000606857 840 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF38AQ8NAV1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 RNU6-529P-201ENST00000363383 104 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 SNORA5B-201ENST00000363786 132 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 RNU6-1180P-201ENST00000364935 107 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 SNORA51.4-201ENST00000364993 124 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 Y_RNA.500-201ENST00000384466 111 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 MIR186-201ENST00000384988 86 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 FO393413.1-201ENST00000402892 195 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 SNORA11.2-201ENST00000408318 127 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 AC104332.2-201ENST00000429959 156 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 AC092427.1-202ENST00000430569 476 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 USP9YP30-201ENST00000430729 455 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 MTND3P23-201ENST00000431980 347 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 AL031659.1-201ENST00000447075 539 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 SNRPGP7-201ENST00000469016 106 ntBASIC3.46□□□□□ -1.86
PRPF38AQ8NAV1 AC104564.1-201ENST00000493028 407 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 250.1 ms