Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SNORA4.3-201ENST00000365564 137 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 RNA5SP269-201ENST00000459032 137 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 RNVU1-2-201ENST00000516326 135 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 RNU6-1315P-201ENST00000517187 99 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 OR8K2P-201ENST00000524645 927 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 AP003122.4-201ENST00000530980 758 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 MIR1273C-201ENST00000578669 77 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 BNIP3P30-201ENST00000601184 574 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 AL358072.1-201ENST00000604156 575 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 AC023158.2-201ENST00000614876 543 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 MIR8065-201ENST00000620577 100 ntBASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
ARHGEF28Q8N1W1 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 SNORD114-6-201ENST00000364393 72 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 Y_RNA.311-201ENST00000365068 96 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 RNU6-843P-201ENST00000384454 104 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 MIR1912-201ENST00000410389 80 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 Y_RNA.597-201ENST00000410463 100 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AC245047.4-201ENST00000433189 144 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AC003071.1-201ENST00000451219 789 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AC093899.1-201ENST00000457984 376 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 snoU13.14-201ENST00000459372 104 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 RNU6-1028P-201ENST00000517164 93 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AP003034.1-201ENST00000534621 422 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AL136520.1-202ENST00000555494 763 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 CYP4A27P-201ENST00000567218 190 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 AC112220.2-201ENST00000605513 533 ntBASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
ARHGEF28Q8N1W1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 RNU2-7P-201ENST00000410794 178 ntBASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 MTND4P3-201ENST00000417829 541 ntBASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 MTCO2P1-201ENST00000424648 477 ntBASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 RNA5SP404-201ENST00000517118 132 ntBASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 AP006587.4-201ENST00000526053 529 ntBASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 APOOP3-201ENST00000536787 586 ntBASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 AC092574.1-201ENST00000609771 420 ntBASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ARHGEF28Q8N1W1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 snoU2_19.1-201ENST00000362361 80 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 RNU6-1274P-201ENST00000384557 107 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 USP9YP21-201ENST00000420603 432 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 UBE2V1P8-201ENST00000437166 265 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 EEF1E1P1-201ENST00000446998 430 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 MTND1P3-201ENST00000484956 952 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 MIR3937-201ENST00000580135 106 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 AC146944.4-201ENST00000602697 718 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 MIR8063-201ENST00000621930 81 ntBASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.78□□□□□ -2.29
ARHGEF28Q8N1W1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 RNU6-23P-201ENST00000363283 107 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 SNORD116-20-201ENST00000384529 92 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AL357139.1-201ENST00000407792 426 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AL627311.1-201ENST00000431514 115 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 RPS15AP10-201ENST00000432472 382 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AL606517.1-201ENST00000446914 387 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 MTND1P16-201ENST00000465177 898 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 MED28P2-201ENST00000475771 317 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 RPL30P1-201ENST00000488676 339 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 MTND2P33-201ENST00000506452 1031 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 MIR3169-201ENST00000578032 83 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 BNIP3P26-201ENST00000600827 554 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AL354696.1-201ENST00000614652 497 ntBASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
ARHGEF28Q8N1W1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 AL365338.1-201ENST00000422282 858 ntBASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 SNORA77B-201ENST00000578179 125 ntBASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 AC124016.2-201ENST00000610058 665 ntBASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 AL365204.3-201ENST00000612448 685 ntBASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 MTND5P42-201ENST00000637720 498 ntBASIC0.76□□□□□ -2.29
ARHGEF28Q8N1W1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms