Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-874P-201ENST00000362390 105 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 Y_RNA.26-201ENST00000362539 101 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 Y_RNA.214-201ENST00000364201 112 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP48Q86UV5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 EIF1AXP1-201ENST00000419267 435 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 RPS15AP5-201ENST00000436276 388 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 AC006028.1-201ENST00000438379 402 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 Z75741.1-201ENST00000446793 314 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 RNU7-23P-201ENST00000459465 62 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 AC097462.2-201ENST00000504623 481 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 RNA5SP341-201ENST00000516261 117 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.2□□□□□ -1.74
USP48Q86UV5 AC006600.1-201ENST00000572529 153 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 AC060766.3-201ENST00000591442 263 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 VN1R91P-201ENST00000594377 169 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 Z98751.3-201ENST00000604447 521 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 AL356157.2-201ENST00000605122 111 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP48Q86UV5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP48Q86UV5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP48Q86UV5 HAUS6P2-201ENST00000433254 2404 ntBASIC4.2□□□□□ -1.74
USP48Q86UV5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP48Q86UV5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.19□□□□□ -1.74
USP48Q86UV5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP48Q86UV5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.19□□□□□ -1.74
USP48Q86UV5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.19□□□□□ -1.74
USP48Q86UV5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP48Q86UV5 MIR30E-201ENST00000362104 92 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 SNORD14.1-201ENST00000365609 90 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 Y_RNA.447-201ENST00000384184 113 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 MT-TW-201ENST00000387382 68 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 SNORA69.1-201ENST00000390904 137 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 SAR1AP2-201ENST00000392696 594 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 ELOCP20-201ENST00000422460 345 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 AL161651.1-201ENST00000440882 223 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 AC007969.2-201ENST00000441891 191 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.19□□□□□ -1.74
USP48Q86UV5 RNU7-169P-201ENST00000459456 61 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 MTND1P19-201ENST00000511780 315 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 RNU5F-8P-201ENST00000515941 111 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 ACA59.2-201ENST00000517061 156 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 Y_RNA.715-201ENST00000517082 110 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 AC023157.2-201ENST00000540596 141 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 AC104581.2-201ENST00000572227 430 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 MIR4474-201ENST00000579189 78 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 AC125232.2-201ENST00000592457 143 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 AC100812.1-201ENST00000607622 580 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 AP003355.3-201ENST00000623465 114 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.19□□□□□ -1.74
USP48Q86UV5 AC233981.2-201ENST00000611524 1614 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 AC010680.1-201ENST00000590024 3590 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP48Q86UV5 AC068647.1-201ENST00000489539 2265 ntBASIC4.19□□□□□ -1.74
USP48Q86UV5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP48Q86UV5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP48Q86UV5 Y_RNA.257-201ENST00000364596 102 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 RNU1-140P-201ENST00000365040 165 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 RNU6-968P-201ENST00000384076 107 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
USP48Q86UV5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
USP48Q86UV5 AC245291.1-201ENST00000419501 328 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 ARL5AP4-201ENST00000430731 512 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.18□□□□□ -1.74
USP48Q86UV5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.18□□□□□ -1.74
USP48Q86UV5 OSTCP8-201ENST00000445117 448 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 AL031659.1-201ENST00000447075 539 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.18□□□□□ -1.74
USP48Q86UV5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.18□□□□□ -1.74
USP48Q86UV5 SNORA31.23-201ENST00000517219 133 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 TGIF1P1-201ENST00000558095 802 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.18□□□□□ -1.74
USP48Q86UV5 MIR5004-201ENST00000579078 107 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 AC233263.6-201ENST00000631132 1963 ntBASIC4.18□□□□□ -1.74
USP48Q86UV5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.17□□□□□ -1.74
USP48Q86UV5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP48Q86UV5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
USP48Q86UV5 RNU4-9P-201ENST00000364951 139 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 RNU6-806P-201ENST00000365147 105 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.17□□□□□ -1.74
USP48Q86UV5 RNU6-843P-201ENST00000384454 104 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 Y_RNA.526-201ENST00000384572 110 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 MIR628-201ENST00000385229 95 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USP48Q86UV5 SNORA12.2-201ENST00000391040 156 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 MTCO3P29-201ENST00000432119 779 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.17□□□□□ -1.74
USP48Q86UV5 AC073910.1-201ENST00000445047 438 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 RPS26P21-201ENST00000475397 348 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 AC093852.1-201ENST00000503587 266 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.17□□□□□ -1.74
USP48Q86UV5 RNU7-175P-201ENST00000515915 61 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 RNU6-911P-201ENST00000516523 104 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 SNORD19.2-201ENST00000516978 73 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 AC040926.1-201ENST00000530195 238 ntBASIC4.17□□□□□ -1.74
USP48Q86UV5 AC078938.1-201ENST00000620993 318 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms