Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNA5SP68-201ENST00000363885 119 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 Y_RNA.414-201ENST00000384011 101 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LDB1Q86U70 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.44□□□□□ -2.02
LDB1Q86U70 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.44□□□□□ -2.02
LDB1Q86U70 VN1R36P-201ENST00000414936 291 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 SNAP23P1-201ENST00000433229 246 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.44□□□□□ -2.02
LDB1Q86U70 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.44□□□□□ -2.02
LDB1Q86U70 AC090096.1-201ENST00000489168 390 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 AC104576.1-201ENST00000524225 88 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 AF235103.2-201ENST00000525753 346 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 AC115990.1-201ENST00000526957 301 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 AC026371.1-201ENST00000551867 419 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 MIR3162-201ENST00000581818 82 ntBASIC2.44□□□□□ -2.02
LDB1Q86U70 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
LDB1Q86U70 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
LDB1Q86U70 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.44□□□□□ -2.02
LDB1Q86U70 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.43□□□□□ -2.02
LDB1Q86U70 AL136360.1-201ENST00000503377 1900 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.43□□□□□ -2.02
LDB1Q86U70 RNU6-1252P-201ENST00000363054 104 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 Y_RNA.248-201ENST00000364501 109 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 RNA5SP240-201ENST00000365355 128 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LDB1Q86U70 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LDB1Q86U70 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
LDB1Q86U70 CBX3P9-201ENST00000402326 552 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.43□□□□□ -2.02
LDB1Q86U70 AL513185.2-201ENST00000425543 193 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.43□□□□□ -2.02
LDB1Q86U70 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.43□□□□□ -2.02
LDB1Q86U70 RPS3P1-201ENST00000456781 192 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 CYP2C59P-201ENST00000457790 269 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 RNU7-26P-201ENST00000458980 63 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 SNORA59A-201ENST00000459326 152 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AC090515.1-201ENST00000465295 476 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AL121594.1-201ENST00000475906 575 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 CKS1BP2-201ENST00000497342 240 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.43□□□□□ -2.02
LDB1Q86U70 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.43□□□□□ -2.02
LDB1Q86U70 AC092436.3-201ENST00000511788 257 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 RNU6-1314P-201ENST00000517139 104 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
LDB1Q86U70 AC060766.3-201ENST00000591442 263 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AL713866.2-201ENST00000603579 219 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AL138963.2-201ENST00000605137 226 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LDB1Q86U70 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 AC009233.1-201ENST00000616477 371 ntBASIC2.43□□□□□ -2.02
LDB1Q86U70 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
LDB1Q86U70 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.43□□□□□ -2.02
LDB1Q86U70 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LDB1Q86U70 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNU6-1285P-201ENST00000363480 105 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNU6-1141P-201ENST00000364520 107 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 U3.13-201ENST00000364804 214 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNA5SP125-201ENST00000364843 120 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 U8.8-201ENST00000365399 135 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNU6-43P-201ENST00000384302 107 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNU6-1072P-201ENST00000384703 107 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNU6-443P-201ENST00000384780 107 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNU2-63P-201ENST00000410792 194 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 AC009963.1-201ENST00000417265 157 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 AIMP1P2-201ENST00000425294 312 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.42□□□□□ -2.02
LDB1Q86U70 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.42□□□□□ -2.02
LDB1Q86U70 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.42□□□□□ -2.02
LDB1Q86U70 RPL30P1-201ENST00000488676 339 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.42□□□□□ -2.02
LDB1Q86U70 AC069439.1-201ENST00000494739 167 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.42□□□□□ -2.02
LDB1Q86U70 AF213884.2-201ENST00000510417 903 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNU6-358P-201ENST00000516564 75 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 RNU6-256P-201ENST00000516747 97 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.42□□□□□ -2.02
LDB1Q86U70 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.42□□□□□ -2.02
LDB1Q86U70 TRAV32-201ENST00000553993 340 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 MIR4672-201ENST00000583126 81 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.42□□□□□ -2.02
LDB1Q86U70 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 AP001836.1-201ENST00000604675 523 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
LDB1Q86U70 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
LDB1Q86U70 MTND4P23-201ENST00000447723 1363 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 RNU1-138P-201ENST00000384093 164 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 Y_RNA.500-201ENST00000384466 111 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LDB1Q86U70 RNA5SP181-201ENST00000410246 98 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.41□□□□□ -2.02
LDB1Q86U70 AL139415.2-201ENST00000431968 163 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AC236972.1-201ENST00000433225 199 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 RPS12P2-201ENST00000439728 269 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 MTCO3P18-201ENST00000440206 761 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AL161788.1-201ENST00000441805 169 ntBASIC2.41□□□□□ -2.02
LDB1Q86U70 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.41□□□□□ -2.02
LDB1Q86U70 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms