Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC091152.3-201ENST00000604227 325 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AC107952.2-201ENST00000606048 486 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AF129408.1-201ENST00000608767 431 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AC009237.15-201ENST00000610252 501 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 AC073349.3-201ENST00000617616 186 ntBASIC0.03□□□□□ -2.4
CSPG4Q6UVK1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 snoU2_19.1-201ENST00000362361 80 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 SNORD114-28-201ENST00000363610 72 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-77P-201ENST00000410554 91 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 ISCA1P1-201ENST00000426679 387 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AL353752.1-201ENST00000454946 260 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 snoU13.25-201ENST00000458945 104 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC108740.1-201ENST00000498629 225 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC105758.1-201ENST00000506038 399 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 Y_RNA.659-201ENST00000515994 113 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-586P-201ENST00000517265 104 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 ARL2BPP5-201ENST00000523141 481 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC093027.1-201ENST00000546698 429 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 MIR3169-201ENST00000578032 83 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC005261.5-201ENST00000596280 355 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 Z98751.3-201ENST00000604447 521 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC112220.2-201ENST00000605513 533 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 AC239868.4-201ENST00000608318 671 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.03□□□□□ -2.41
CSPG4Q6UVK1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 Y_RNA.245-201ENST00000364493 95 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 SNORA72.2-201ENST00000365028 127 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AL359704.1-201ENST00000411586 781 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 RAC1P8-201ENST00000427086 527 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 PSMA6P3-201ENST00000428242 164 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC013828.1-201ENST00000481845 158 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC009646.1-201ENST00000510455 318 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 RNA5SP168-201ENST00000516642 112 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 RNU6-1092P-201ENST00000516955 87 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AP003049.1-201ENST00000529418 457 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC022616.8-201ENST00000533569 253 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 BPTFP1-201ENST00000579209 492 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC022432.1-201ENST00000595739 310 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC068205.3-201ENST00000636385 468 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AL391994.1-201ENST00000254724 282 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 MIR103A1-201ENST00000362165 78 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 RNU6-898P-201ENST00000365627 104 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 Y_RNA.495-201ENST00000384435 112 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 Y_RNA.568-201ENST00000384742 113 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC073261.1-201ENST00000429409 121 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC005345.1-201ENST00000431868 217 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 TIMM9P1-201ENST00000436122 256 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 SNORA31.2-201ENST00000516019 134 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC002400.1-201ENST00000569310 726 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AL020997.3-201ENST00000602843 359 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC004853.1-201ENST00000604902 698 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 KATNBL1P5-201ENST00000605015 517 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 RNU4-5P-201ENST00000607255 135 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 AC107075.1-201ENST00000613695 314 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 U4.2-201ENST00000618561 85 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 7SK.10-201ENST00000621414 298 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 MIR198-201ENST00000637333 62 ntBASIC0.02□□□□□ -2.41
CSPG4Q6UVK1 RNU6-619P-201ENST00000365146 108 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 MIR421-201ENST00000365696 85 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 MTCO3P17-201ENST00000443775 513 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 OR2AQ1P-201ENST00000451972 200 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU6-567P-201ENST00000516746 107 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC018630.3-201ENST00000542637 96 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC015688.6-201ENST00000577737 104 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC090330.1-201ENST00000588646 764 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC090578.1-201ENST00000604955 591 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms