Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR490-201ENST00000384865 128 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 MT-TD-201ENST00000387419 68 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 BTF3L4P2-201ENST00000392798 346 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-1050P-201ENST00000410388 107 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 RN7SKP58-201ENST00000411010 305 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-1304P-201ENST00000411374 106 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 AL161788.1-201ENST00000441805 169 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 CYP2C59P-201ENST00000457790 269 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 FO393415.2-201ENST00000480085 343 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 RNU5F-2P-201ENST00000516066 82 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-559P-201ENST00000516151 98 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 HSPE1P4-201ENST00000550617 308 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 AC109446.1-201ENST00000566172 220 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 AL158827.2-201ENST00000602494 330 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 AC009318.2-201ENST00000610917 651 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 AL691447.3-201ENST00000635020 330 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 AP000560.1-201ENST00000624150 1937 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.58-201ENST00000362807 102 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.154-201ENST00000363624 102 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 RNA5SP72-201ENST00000364442 117 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 RNY3P1-201ENST00000365085 102 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 RNY3-201ENST00000365484 102 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 SNORA70.4-201ENST00000365509 134 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.490-201ENST00000384413 102 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 RNU2-63P-201ENST00000410792 194 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 AC244670.1-201ENST00000436879 112 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 CST9LP2-201ENST00000437612 320 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.632-201ENST00000459189 102 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 RPL7P42-201ENST00000481005 679 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 AC114801.2-201ENST00000503825 781 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 MRPS36P4-201ENST00000534436 298 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 AL669831.3-213ENST00000636676 183 ntBASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PPP4R4Q6NUP7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 RNU4-79P-201ENST00000362764 141 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.387-201ENST00000383918 102 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AL591034.2-201ENST00000402839 359 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC078809.1-201ENST00000427601 140 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 CYCSP4-201ENST00000429682 331 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AL353752.1-201ENST00000454946 260 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC008571.1-201ENST00000467232 300 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AIG1P1-201ENST00000503376 148 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC022447.4-201ENST00000504053 364 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC005741.1-201ENST00000511094 432 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 RNA5SP384-201ENST00000516615 116 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.708-201ENST00000516950 96 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 CBX3P7-201ENST00000532876 502 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC007458.1-201ENST00000542812 373 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 MIR4658-201ENST00000584344 65 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AC060766.3-201ENST00000591442 263 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 AL627309.6-201ENST00000606857 840 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 MTND4LP32-201ENST00000636111 270 ntBASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PPP4R4Q6NUP7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AC073346.2-201ENST00000624724 2058 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AL353743.1-202ENST00000431724 1695 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AL356274.2-201ENST00000624379 3752 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.67-201ENST00000362870 100 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 RNA5SP197-201ENST00000363357 119 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 MIR34B-201ENST00000385076 84 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 SNORA75.4-201ENST00000391278 119 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AL139281.1-201ENST00000422120 335 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 RPL23AP83-201ENST00000434984 473 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 UQCRHP3-201ENST00000451503 251 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AC090525.1-201ENST00000479116 478 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 FCF1P8-201ENST00000510322 597 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AC074250.1-201ENST00000511117 192 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 ACA59.1-201ENST00000515966 143 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 SNORA48.11-201ENST00000517015 89 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 MIR5696-201ENST00000578474 85 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 U4atac.1-201ENST00000618345 95 ntBASIC3.09□□□□□ -1.91
PPP4R4Q6NUP7 AC008121.3-201ENST00000618726 433 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms