Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 Y_RNA.383-201ENST00000383855 97 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-213P-201ENST00000384051 104 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-622P-201ENST00000384272 103 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNA5SP390-201ENST00000410191 113 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 Y_RNA.595-201ENST00000410403 105 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 RN7SKP51-201ENST00000410781 304 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC019205.3-201ENST00000424573 156 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 POLR2KP2-201ENST00000438155 177 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 RPS29P7-201ENST00000439662 171 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 snoU13.28-201ENST00000459235 104 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 COX6CP14-201ENST00000469580 174 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 SNORA27.4-201ENST00000516650 95 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 RNU6-1212P-201ENST00000517023 104 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 AC022695.1-201ENST00000522089 237 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 MIR3910-1-201ENST00000580936 111 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 MIR4282-201ENST00000583613 67 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 MZT1P2-201ENST00000604387 248 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 HSPE1P7-201ENST00000604681 321 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 AL354798.1-201ENST00000622505 329 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 MIR3199-2-201ENST00000636243 86 ntBASIC3.59□□□□□ -1.83
HLA-DQA1Q5Y7H0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DQA1Q5Y7H0 ZNF204P-201ENST00000416749 2397 ntBASIC3.59□□□□□ -1.84
HLA-DQA1Q5Y7H0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC018529.3-201ENST00000624212 2254 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-1020P-201ENST00000363684 107 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-1289P-201ENST00000384431 106 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL390729.2-201ENST00000416137 156 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC009237.7-201ENST00000447357 229 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 RPL21P104-201ENST00000464143 478 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC109925.1-201ENST00000478069 331 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC090525.1-201ENST00000479116 478 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 RPS4XP13-201ENST00000483219 789 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-966P-201ENST00000516479 104 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNA5SP54-201ENST00000516951 92 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 MIR5685-201ENST00000579080 79 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DQA1Q5Y7H0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 UBE2WP1-201ENST00000362030 340 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU1-64P-201ENST00000365443 163 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.506-201ENST00000384494 102 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-125P-201ENST00000384505 107 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 SNORA26.3-201ENST00000391119 136 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 RPL23AP36-201ENST00000413895 458 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC112220.1-201ENST00000434628 355 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 HMGN2P16-201ENST00000456802 261 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.638-201ENST00000459374 113 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC108043.1-201ENST00000512696 574 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNY3P16-201ENST00000516338 101 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 MIR3609-201ENST00000582661 80 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 MIR4727-201ENST00000622232 55 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC048347.1-201ENST00000624621 427 ntBASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-DQA1Q5Y7H0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 MTND5P35-201ENST00000557537 1720 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.82-201ENST00000363000 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.92-201ENST00000363043 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.136-201ENST00000363444 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.235-201ENST00000364412 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.306-201ENST00000365015 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.312-201ENST00000365089 102 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms