Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU6-581P-201ENST00000516214 105 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 SNORD116-25-201ENST00000516517 92 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 RNU6-1282P-201ENST00000516735 96 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF20Q5VTR2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF20Q5VTR2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF20Q5VTR2 AC021231.3-201ENST00000558497 370 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 AC012468.1-201ENST00000604888 430 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 MIR6748-201ENST00000610433 71 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RNF20Q5VTR2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.76□□□□□ -1.65
RNF20Q5VTR2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF20Q5VTR2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RNF20Q5VTR2 Y_RNA.182-201ENST00000363880 111 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 Y_RNA.357-201ENST00000365487 109 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 Y_RNA.412-201ENST00000384001 104 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 RPS26P8-201ENST00000393490 348 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF20Q5VTR2 RPL30P12-201ENST00000474666 353 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 AC108043.1-201ENST00000512696 574 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 SUMO2P18-201ENST00000518873 252 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 AL451007.1-201ENST00000595491 289 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RNF20Q5VTR2 AC100821.1-201ENST00000523153 2479 ntBASIC4.75□□□□□ -1.65
RNF20Q5VTR2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF20Q5VTR2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
RNF20Q5VTR2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF20Q5VTR2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF20Q5VTR2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 RNU6-1272P-201ENST00000362776 107 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 RNU6-1168P-201ENST00000390831 104 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 SNORA40.19-201ENST00000390846 128 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 Y_RNA.586-201ENST00000391146 98 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AL512633.1-201ENST00000399931 655 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AL138878.1-201ENST00000405131 347 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AC012306.1-201ENST00000423267 114 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AC078809.1-201ENST00000427601 140 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 NDUFB4P6-201ENST00000436819 366 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AC083863.1-201ENST00000438811 231 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AC078817.1-201ENST00000492623 435 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 RNU6-426P-201ENST00000516464 97 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 HSPE1P5-201ENST00000561489 272 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 AL591034.3-201ENST00000605511 685 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 MIR492-201ENST00000638676 116 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 UBE3AP2-201ENST00000429033 2259 ntBASIC4.74□□□□□ -1.65
RNF20Q5VTR2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF20Q5VTR2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF20Q5VTR2 AC092268.1-201ENST00000342691 405 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RNA5SP399-201ENST00000364003 117 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RNU6-151P-201ENST00000364158 107 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RNA5SP130-201ENST00000364431 114 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RNU6-312P-201ENST00000364629 107 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RNU6-1199P-201ENST00000411249 104 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF20Q5VTR2 VDAC1P3-201ENST00000434069 851 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RPL39P29-201ENST00000447779 157 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 AC012308.1-201ENST00000451232 178 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 S100A11P1-201ENST00000477525 312 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RPS29P20-201ENST00000489592 171 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF20Q5VTR2 AC078918.1-201ENST00000498515 228 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 AC026726.1-201ENST00000512859 601 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF20Q5VTR2 MIR6830-201ENST00000636015 70 ntBASIC4.73□□□□□ -1.65
RNF20Q5VTR2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF20Q5VTR2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF20Q5VTR2 RNU6-727P-201ENST00000363592 107 ntBASIC4.72□□□□□ -1.65
RNF20Q5VTR2 SNORA70C-201ENST00000384538 135 ntBASIC4.72□□□□□ -1.65
RNF20Q5VTR2 ELOCP21-201ENST00000412558 336 ntBASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AL691449.1-201ENST00000426570 421 ntBASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 RPS27AP9-201ENST00000477681 438 ntBASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AC009163.5-201ENST00000575421 637 ntBASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 MIR486-1-201ENST00000612171 68 ntBASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF20Q5VTR2 AL133412.1-201ENST00000380194 2992 ntBASIC4.71□□□□□ -1.65
RNF20Q5VTR2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RNF20Q5VTR2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF20Q5VTR2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
RNF20Q5VTR2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms