Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 MTND1P11-201ENST00000456661 876 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 RNU7-187P-201ENST00000458985 68 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AC130509.1-201ENST00000464158 433 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 RNA5SP341-201ENST00000516261 117 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 RNU6-273P-201ENST00000516937 96 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 AP005902.1-201ENST00000521358 186 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AC118273.2-201ENST00000532092 465 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AC026464.5-201ENST00000562497 722 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AL356575.1-201ENST00000603008 283 ntBASIC2.92□□□□□ -1.94
CCDC38Q502W7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC38Q502W7 U3.13-201ENST00000364804 214 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 Y_RNA.390-201ENST00000383932 102 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC38Q502W7 BTF3L4P2-201ENST00000392798 346 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 AL360182.1-201ENST00000397433 468 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 RN7SKP32-201ENST00000410167 303 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 RN7SKP61-201ENST00000410642 295 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC38Q502W7 AC003685.2-201ENST00000422795 395 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 AC244670.1-201ENST00000436879 112 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 MRPL50P4-201ENST00000446432 475 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 PPP1R2P5-201ENST00000457256 603 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 RPS29P27-201ENST00000463711 170 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 SNRPGP7-201ENST00000469016 106 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 AC022447.4-201ENST00000504053 364 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC38Q502W7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 SNORA20.3-201ENST00000516880 132 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 RNA5SP454-201ENST00000517231 127 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC38Q502W7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC38Q502W7 AC243972.3-201ENST00000539655 198 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 MIR4325-201ENST00000583049 90 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 AL713866.2-201ENST00000603579 219 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 AL133215.3-201ENST00000609801 448 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 AC010297.1-201ENST00000623948 149 ntBASIC2.91□□□□□ -1.94
CCDC38Q502W7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC38Q502W7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.9□□□□□ -1.94
CCDC38Q502W7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC38Q502W7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC38Q502W7 RNU6-845P-201ENST00000362578 103 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 SNORA25.6-201ENST00000364121 118 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC38Q502W7 AL139396.1-201ENST00000421137 167 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 AL133396.1-201ENST00000432048 687 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 USP9YP8-201ENST00000441913 500 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC38Q502W7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC38Q502W7 CYP2C59P-201ENST00000457790 269 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 PMCHL2-203ENST00000457791 237 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 AC090515.1-201ENST00000465295 476 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC38Q502W7 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 HSPE1P4-201ENST00000550617 308 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC38Q502W7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC38Q502W7 AC060766.3-201ENST00000591442 263 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 AC135507.2-201ENST00000612443 309 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 AC009233.1-201ENST00000616477 371 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 SCARNA15.3-201ENST00000626315 122 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 SCARNA4.1-201ENST00000628597 123 ntBASIC2.9□□□□□ -1.95
CCDC38Q502W7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC38Q502W7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC38Q502W7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC38Q502W7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC38Q502W7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC38Q502W7 Y_RNA.166-201ENST00000363730 102 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 RNA5SP240-201ENST00000365355 128 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 DEFA7P-201ENST00000382676 285 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 AL138885.1-201ENST00000405921 675 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 RNU2-63P-201ENST00000410792 194 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 MTND3P10-201ENST00000450967 341 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 PCMTD1P1-201ENST00000455560 355 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC38Q502W7 AC016632.1-201ENST00000503994 196 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC38Q502W7 RNU5F-2P-201ENST00000516066 82 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC38Q502W7 AP002404.1-201ENST00000532005 451 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 AC093249.1-201ENST00000567049 203 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 MIR3136-201ENST00000583498 78 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 AC018889.1-201ENST00000605372 397 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 AC022306.2-201ENST00000617563 647 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC38Q502W7 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC38Q502W7 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
CCDC38Q502W7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC38Q502W7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC38Q502W7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC38Q502W7 AC092268.1-201ENST00000342691 405 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 SNORD62.1-201ENST00000362541 86 ntBASIC2.88□□□□□ -1.95
CCDC38Q502W7 Y_RNA.151-201ENST00000363566 112 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms