Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KHDC1Q4VXA5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KHDC1Q4VXA5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.158-201ENST00000363651 101 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.364-201ENST00000365532 101 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 RNU6-968P-201ENST00000384076 107 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 SNORA46-201ENST00000384762 135 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 MIR147B-201ENST00000390185 80 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 RNU1-101P-201ENST00000391171 127 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 MRPL42P3-201ENST00000401492 326 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 RN7SKP61-201ENST00000410642 295 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 RN7SKP123-201ENST00000410732 291 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 AC007098.1-201ENST00000420122 367 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 MTND2P23-201ENST00000422990 651 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 GSTA11P-201ENST00000452866 669 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 RN7SL504P-201ENST00000494496 287 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 AC091874.1-201ENST00000511402 339 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 RNU7-4P-201ENST00000516961 62 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 MRPS36P4-201ENST00000534436 298 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 HSPE1P4-201ENST00000550617 308 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 AC004584.2-201ENST00000570407 410 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 AC073657.2-201ENST00000605661 303 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 AL021368.2-201ENST00000606125 5352 ntBASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
KHDC1Q4VXA5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AC002543.1-201ENST00000299783 1954 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AC091564.4-201ENST00000533934 2194 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 SNORA51.4-201ENST00000364993 124 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.314-201ENST00000365114 102 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 RNU6-1286P-201ENST00000383871 107 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 MIR625-201ENST00000385047 85 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 RNU2-23P-201ENST00000410545 195 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 RNA5SP494-201ENST00000410653 129 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AL160004.2-201ENST00000432935 350 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 OSTCP8-201ENST00000445117 448 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 RPL30P12-201ENST00000474666 353 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AC016632.1-201ENST00000503994 196 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AC105758.1-201ENST00000506038 399 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 IGHV3-76-201ENST00000522465 295 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 GNAI2P1-201ENST00000541815 315 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AC104581.2-201ENST00000572227 430 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AL355877.2-201ENST00000603670 358 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 YPEL5P2-201ENST00000605553 359 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AC116312.1-201ENST00000606841 314 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 uc_338.14-201ENST00000613162 166 ntBASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.2□□□□□ -1.9
KHDC1Q4VXA5 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 MAPK10-362ENST00000641864 4484 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.145-201ENST00000363527 102 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 RNU4-9P-201ENST00000364951 139 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC009414.1-201ENST00000427200 443 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 RPL23AP75-201ENST00000491601 451 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 RNU7-175P-201ENST00000515915 61 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 RNU4-77P-201ENST00000516692 156 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC109329.1-201ENST00000518744 317 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC144568.1-201ENST00000520139 137 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC105137.2-201ENST00000569073 466 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 MIR5680-201ENST00000577577 84 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 RPS15AP11-201ENST00000594193 385 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 SNORA43.4-201ENST00000629559 138 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 MIR3651-201ENST00000630427 90 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 AC110079.1-202ENST00000635213 138 ntBASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KHDC1Q4VXA5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 AL353743.1-202ENST00000431724 1695 ntBASIC3.18□□□□□ -1.9
KHDC1Q4VXA5 MTND4P1-201ENST00000457501 1466 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms