Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SSRP1Q08945 MIR190B-201ENST00000401119 79 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 AC096644.2-201ENST00000429278 159 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 MTND3P2-201ENST00000438452 342 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.75□□□□□ -1.81
SSRP1Q08945 snoU13.30-201ENST00000458951 104 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 RNU7-169P-201ENST00000459456 61 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 RPL30P12-201ENST00000474666 353 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 RPL23AP75-201ENST00000491601 451 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 GZMAP1-201ENST00000503054 631 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 SNORA64.4-201ENST00000516632 81 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 Y_RNA.706-201ENST00000516933 99 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.75□□□□□ -1.81
SSRP1Q08945 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.75□□□□□ -1.81
SSRP1Q08945 AC007375.1-201ENST00000554513 578 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 AC006600.1-201ENST00000572529 153 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 RPL23AP78-201ENST00000599928 470 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 AC007179.3-201ENST00000604976 235 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 RPL23AP88-201ENST00000605759 454 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 U6.98-201ENST00000637157 84 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 AC091152.2-201ENST00000591628 2569 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSRP1Q08945 MAPK10-322ENST00000641485 4530 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSRP1Q08945 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SSRP1Q08945 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSRP1Q08945 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.74□□□□□ -1.81
SSRP1Q08945 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSRP1Q08945 RNU6-525P-201ENST00000363685 104 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 Y_RNA.389-201ENST00000383924 113 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 SNORA69.1-201ENST00000390904 137 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 AL356057.3-201ENST00000402607 340 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 RNU6-101P-201ENST00000410323 104 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 AC004383.1-201ENST00000438135 289 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 RPL30P1-201ENST00000488676 339 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.74□□□□□ -1.81
SSRP1Q08945 MIR2682-201ENST00000580305 110 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 MIR5188-201ENST00000583467 113 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 VN1R91P-201ENST00000594377 169 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 AL355877.2-201ENST00000603670 358 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 AC016727.2-201ENST00000603988 621 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 XIST_intron.1-201ENST00000619444 68 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 AC007792.1-201ENST00000623023 402 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 AL078596.1-201ENST00000624856 447 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SSRP1Q08945 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSRP1Q08945 AL353743.1-202ENST00000431724 1695 ntBASIC3.74□□□□□ -1.81
SSRP1Q08945 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSRP1Q08945 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.74□□□□□ -1.81
SSRP1Q08945 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSRP1Q08945 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSRP1Q08945 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSRP1Q08945 AC092268.1-201ENST00000342691 405 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 RNU6-874P-201ENST00000362390 105 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 SNORA29-201ENST00000384183 140 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AL358176.2-201ENST00000425769 204 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AC078809.1-201ENST00000427601 140 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 Z82188.1-201ENST00000436709 154 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.73□□□□□ -1.81
SSRP1Q08945 GPM6BP3-201ENST00000442797 145 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AC021146.2-201ENST00000504736 556 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AC110794.1-201ENST00000505816 425 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 SCARNA20.6-201ENST00000517251 106 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AC105137.2-201ENST00000569073 466 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 MIR5571-201ENST00000577998 113 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AC113195.1-201ENST00000579952 141 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 RPS15AP11-201ENST00000594193 385 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AC096772.1-201ENST00000609146 564 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AL132822.1-201ENST00000617063 513 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AC008121.3-201ENST00000618726 433 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 U2.1-201ENST00000618978 145 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.73□□□□□ -1.81
SSRP1Q08945 MIR7153-201ENST00000637758 57 ntBASIC3.73□□□□□ -1.81
SSRP1Q08945 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSRP1Q08945 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SSRP1Q08945 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SSRP1Q08945 ZNF826P-207ENST00000622273 1910 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AP000560.1-201ENST00000624150 1937 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSRP1Q08945 RNU6-1285P-201ENST00000363480 105 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 SNORD115-32-201ENST00000364079 82 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 SNORD14.1-201ENST00000365609 90 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSRP1Q08945 RNU6-1105P-201ENST00000384774 107 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 MIR628-201ENST00000385229 95 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 RNU6-823P-201ENST00000391042 103 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 RNA5SP354-201ENST00000391247 136 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AL357075.1-201ENST00000404107 726 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AL133475.1-201ENST00000404414 305 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 Y_RNA.592-201ENST00000410274 109 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.72□□□□□ -1.81
SSRP1Q08945 AC244670.1-201ENST00000436879 112 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.72□□□□□ -1.81
SSRP1Q08945 AC009296.1-201ENST00000443146 155 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 RPS27P26-201ENST00000494583 239 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 RNU1-143P-201ENST00000516296 146 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 RNU6-911P-201ENST00000516523 104 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AC091144.1-201ENST00000519573 138 ntBASIC3.72□□□□□ -1.81
SSRP1Q08945 AC022616.4-201ENST00000522985 181 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms