Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDK3Q00526 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDK3Q00526 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.42□□□□□ -2.02
CDK3Q00526 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.42□□□□□ -2.02
CDK3Q00526 Y_RNA.40-201ENST00000362645 93 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 U3.13-201ENST00000364804 214 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 RNA5SP126-201ENST00000365092 109 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 RNU6-1148P-201ENST00000410992 104 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 RNA5SP492-201ENST00000411330 114 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 VN1R36P-201ENST00000414936 291 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 RPL30P16-201ENST00000419341 429 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.42□□□□□ -2.02
CDK3Q00526 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.42□□□□□ -2.02
CDK3Q00526 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.42□□□□□ -2.02
CDK3Q00526 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.42□□□□□ -2.02
CDK3Q00526 AC090096.1-201ENST00000489168 390 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.42□□□□□ -2.02
CDK3Q00526 AC010486.1-201ENST00000511793 424 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.42□□□□□ -2.02
CDK3Q00526 RNU2-53P-201ENST00000516257 147 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 AC026371.1-201ENST00000551867 419 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 AC060780.3-201ENST00000589464 80 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 VN1R107P-201ENST00000601784 209 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 BNIP3P10-201ENST00000605360 577 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 AC093913.1-201ENST00000614178 329 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 AL136221.1-201ENST00000621449 509 ntBASIC2.42□□□□□ -2.02
CDK3Q00526 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
CDK3Q00526 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDK3Q00526 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDK3Q00526 RNU6-128P-201ENST00000383976 107 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 RNU6-1222P-201ENST00000384615 107 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 RPL19P1-201ENST00000411635 428 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 UBE2V1P4-201ENST00000425374 344 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 MTCO3P18-201ENST00000440206 761 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 AC090515.1-201ENST00000465295 476 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 AP000852.1-201ENST00000472460 573 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.41□□□□□ -2.02
CDK3Q00526 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.41□□□□□ -2.02
CDK3Q00526 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 RPPH1-2P-201ENST00000516688 293 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 RNU6-256P-201ENST00000516747 97 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 AC004486.1-201ENST00000546846 233 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.41□□□□□ -2.02
CDK3Q00526 MIR5571-201ENST00000577998 113 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 AC100830.2-201ENST00000581636 240 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 AC018638.8-201ENST00000588755 281 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 RPL30P11-203ENST00000598995 310 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CDK3Q00526 AC009033.1-201ENST00000624279 431 ntBASIC2.41□□□□□ -2.02
CDK3Q00526 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CDK3Q00526 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDK3Q00526 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CDK3Q00526 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
CDK3Q00526 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CDK3Q00526 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
CDK3Q00526 MTND4P23-201ENST00000447723 1363 ntBASIC2.4□□□□□ -2.02
CDK3Q00526 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDK3Q00526 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDK3Q00526 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.4□□□□□ -2.03
CDK3Q00526 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 RNU6-655P-201ENST00000362858 107 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 RNU1-72P-201ENST00000362976 153 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 VTRNA1-1-201ENST00000363120 99 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK3Q00526 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK3Q00526 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.4□□□□□ -2.03
CDK3Q00526 SNAP23P1-201ENST00000433229 246 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK3Q00526 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK3Q00526 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.4□□□□□ -2.03
CDK3Q00526 USP9YP8-201ENST00000441913 500 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK3Q00526 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.4□□□□□ -2.03
CDK3Q00526 AMD1P1-201ENST00000457220 922 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 AL121594.1-201ENST00000475906 575 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 AC018710.1-201ENST00000506509 158 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK3Q00526 RNU6-273P-201ENST00000516937 96 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK3Q00526 TRAV32-201ENST00000553993 340 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CDK3Q00526 AC023824.2-201ENST00000566185 400 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 MIR3670-2-201ENST00000582974 65 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 MIR3670-1-201ENST00000584160 65 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 MIR3670-3-201ENST00000584855 65 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 AC091135.1-201ENST00000585943 307 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK3Q00526 RPL23AP88-201ENST00000605759 454 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CDK3Q00526 MIR3670-4-201ENST00000612260 65 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 AL159153.1-201ENST00000619688 317 ntBASIC2.4□□□□□ -2.03
CDK3Q00526 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CDK3Q00526 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.39□□□□□ -2.03
CDK3Q00526 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.39□□□□□ -2.03
CDK3Q00526 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CDK3Q00526 CASC19-280ENST00000642102 1351 ntBASIC2.39□□□□□ -2.03
CDK3Q00526 RNU6-1210P-201ENST00000363775 107 ntBASIC2.39□□□□□ -2.03
CDK3Q00526 RNU6-43P-201ENST00000384302 107 ntBASIC2.39□□□□□ -2.03
CDK3Q00526 RNU6-831P-201ENST00000384548 107 ntBASIC2.39□□□□□ -2.03
CDK3Q00526 AL356776.1-201ENST00000406574 447 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms