Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RN7SKP61-201ENST00000410642 295 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.3□□□□□ -2.04
CX3CL1P78423 AL133396.1-201ENST00000432048 687 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 DAP3P1-201ENST00000441522 278 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 MTND4P18-201ENST00000447010 465 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 MTND5P20-201ENST00000448677 143 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 AC091951.2-201ENST00000500762 203 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 Y_RNA.691-201ENST00000516611 103 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 ELOCP31-201ENST00000540463 467 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 AC022080.3-201ENST00000544433 482 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 HSPE1P4-201ENST00000550617 308 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 AC074050.1-201ENST00000563247 211 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 BNIP3P22-201ENST00000593399 556 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 RPL30P11-203ENST00000598995 310 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 AL713866.2-201ENST00000603579 219 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 AC124303.1-201ENST00000605703 360 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 SNORA43.4-201ENST00000629559 138 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CX3CL1P78423 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.3□□□□□ -2.04
CX3CL1P78423 AC009541.1-201ENST00000438279 2662 ntBASIC2.3□□□□□ -2.04
CX3CL1P78423 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CX3CL1P78423 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CX3CL1P78423 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CX3CL1P78423 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CX3CL1P78423 RNU1-35P-201ENST00000362782 153 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 Y_RNA.339-201ENST00000365325 102 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 U8.8-201ENST00000365399 135 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 BTF3L4P2-201ENST00000392798 346 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 RN7SKP158-201ENST00000410453 326 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 RNA5SP492-201ENST00000411330 114 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 RPL19P1-201ENST00000411635 428 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.29□□□□□ -2.04
CX3CL1P78423 AC074085.1-201ENST00000413598 418 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CL1P78423 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CL1P78423 RPS3AP52-201ENST00000435639 297 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 AC244670.1-201ENST00000436879 112 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CL1P78423 AC104389.3-201ENST00000445629 235 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 EEF1B2P7-201ENST00000451177 676 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 AC090515.1-201ENST00000465295 476 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 S100A11P2-201ENST00000467589 312 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.29□□□□□ -2.04
CX3CL1P78423 MTND4P17-201ENST00000470444 350 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 RN7SL297P-201ENST00000483161 293 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 RPL30P1-201ENST00000488676 339 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 RPS27P27-201ENST00000498779 255 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 RNU6-507P-201ENST00000516045 100 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 Y_RNA.702-201ENST00000516843 96 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CL1P78423 AC115990.1-201ENST00000526957 301 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.29□□□□□ -2.04
CX3CL1P78423 AC078795.3-201ENST00000602913 472 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 MIR8076-201ENST00000611401 83 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 MIR6128-201ENST00000615528 109 ntBASIC2.29□□□□□ -2.04
CX3CL1P78423 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CX3CL1P78423 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CX3CL1P78423 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CX3CL1P78423 Y_RNA.123-201ENST00000363338 102 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CX3CL1P78423 MIR512-1-201ENST00000384913 84 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 CBX3P9-201ENST00000402326 552 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 SNORA11.1-201ENST00000408133 129 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 Z82205.1-201ENST00000428456 297 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.28□□□□□ -2.04
CX3CL1P78423 AC107399.1-201ENST00000451226 265 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AC090096.1-201ENST00000489168 390 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AIG1P1-201ENST00000503376 148 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AC116337.1-201ENST00000509680 687 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.28□□□□□ -2.04
CX3CL1P78423 RN7SKP24-201ENST00000515888 284 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 RNU5F-2P-201ENST00000516066 82 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 RNU6-875P-201ENST00000516488 106 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.28□□□□□ -2.04
CX3CL1P78423 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.28□□□□□ -2.04
CX3CL1P78423 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.28□□□□□ -2.04
CX3CL1P78423 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.28□□□□□ -2.04
CX3CL1P78423 AL161756.2-201ENST00000604597 246 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AC018889.1-201ENST00000605372 397 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AC019193.3-201ENST00000609144 554 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AC009233.1-201ENST00000616477 371 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 AC091953.5-201ENST00000622919 233 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 SNORD98-201ENST00000636377 67 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.28□□□□□ -2.04
CX3CL1P78423 AP000560.1-201ENST00000624150 1937 ntBASIC2.28□□□□□ -2.04
CX3CL1P78423 Z82195.2-201ENST00000612348 18351 ntBASIC2.28□□□□□ -2.05
CX3CL1P78423 MTND4P12-201ENST00000498999 1377 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC096644.4-201ENST00000563417 2912 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AL355596.1-201ENST00000565399 3996 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 RNU6-1032P-201ENST00000384100 107 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 Y_RNA.504-201ENST00000384481 104 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 SNORA26.3-201ENST00000391119 136 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 RNU2-25P-201ENST00000411041 191 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 EEF1A1P41-201ENST00000414667 207 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AC078809.1-201ENST00000427601 140 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 AL353752.1-201ENST00000454946 260 ntBASIC2.27□□□□□ -2.05
CX3CL1P78423 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.27□□□□□ -2.05
CX3CL1P78423 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms