Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 Y_RNA.672-201ENST00000516289 104 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 Y_RNA.675-201ENST00000516389 149 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 ADI1P3-201ENST00000549509 470 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC137800.2-201ENST00000574375 120 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.67□□□□□ -2.14
CCNA1P78396 AC068944.2-201ENST00000610373 403 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC009878.1-201ENST00000621819 340 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AF246928.1-201ENST00000623768 87 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC027514.1-201ENST00000588561 1603 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 RNU6-944P-201ENST00000364023 107 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 SNORA24.1-201ENST00000384401 135 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 RNU6-160P-201ENST00000384591 107 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CCNA1P78396 NCOR1P3-201ENST00000420479 303 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.66□□□□□ -2.14
CCNA1P78396 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.66□□□□□ -2.14
CCNA1P78396 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.66□□□□□ -2.14
CCNA1P78396 AL035666.1-201ENST00000446195 348 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 RNU1-123P-201ENST00000458950 160 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 RPL30P6-201ENST00000475925 342 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 RAP1BP2-201ENST00000478270 544 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.66□□□□□ -2.14
CCNA1P78396 RNU6-965P-201ENST00000516721 96 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 RNU6-232P-201ENST00000517144 64 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.66□□□□□ -2.14
CCNA1P78396 AC022878.1-201ENST00000530684 149 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 RPL21P5-201ENST00000554662 472 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.66□□□□□ -2.14
CCNA1P78396 AC092354.1-201ENST00000606057 376 ntBASIC1.66□□□□□ -2.14
CCNA1P78396 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
CCNA1P78396 RNU6-553P-201ENST00000364047 96 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 MIR558-201ENST00000384920 94 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 RAP1BP3-201ENST00000407180 549 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CCNA1P78396 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.65□□□□□ -2.15
CCNA1P78396 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.65□□□□□ -2.15
CCNA1P78396 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.65□□□□□ -2.15
CCNA1P78396 BZW1P2-201ENST00000473537 826 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 MTND2P33-201ENST00000506452 1031 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 AC022616.3-201ENST00000523940 148 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 AL451064.1-201ENST00000607718 471 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.65□□□□□ -2.15
CCNA1P78396 MIR6078-201ENST00000611069 100 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 AC087683.2-201ENST00000611384 326 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 AC130454.1-201ENST00000622948 401 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 AC079248.2-201ENST00000623779 326 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.65□□□□□ -2.15
CCNA1P78396 AL157786.1-207ENST00000627771 695 ntBASIC1.65□□□□□ -2.15
CCNA1P78396 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CCNA1P78396 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.64□□□□□ -2.15
CCNA1P78396 AP000560.1-201ENST00000624150 1937 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 MIR424-201ENST00000362227 98 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 Y_RNA.22-201ENST00000362492 102 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 Y_RNA.40-201ENST00000362645 93 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 U8.1-201ENST00000362843 134 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 RNU6-23P-201ENST00000363283 107 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 RNU6-743P-201ENST00000364151 106 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.64□□□□□ -2.15
CCNA1P78396 RNU6-338P-201ENST00000383888 105 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 RPL23AP32-201ENST00000395315 459 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 RPS3AP36-201ENST00000398190 775 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 RNU2-39P-201ENST00000410604 198 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 BTF3L4P1-201ENST00000413813 468 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 AL031779.1-201ENST00000415663 330 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 MTCYBP5-201ENST00000423752 1135 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 MED13P1-201ENST00000428342 171 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.64□□□□□ -2.15
CCNA1P78396 AC104850.1-201ENST00000435940 476 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 MTND1P30-201ENST00000441241 901 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 SNRPGP13-201ENST00000442212 177 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.64□□□□□ -2.15
CCNA1P78396 RPL30P1-201ENST00000488676 339 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 MTCYBP35-201ENST00000503630 1137 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 RBBP4P6-201ENST00000508098 202 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 AC093259.1-201ENST00000509755 300 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.64□□□□□ -2.15
CCNA1P78396 FABP5P5-201ENST00000515537 406 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 Y_RNA.687-201ENST00000516558 91 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 SNORA43.2-201ENST00000516652 128 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.64□□□□□ -2.15
CCNA1P78396 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.64□□□□□ -2.15
CCNA1P78396 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.64□□□□□ -2.15
CCNA1P78396 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.64□□□□□ -2.15
CCNA1P78396 MTATP6P24-201ENST00000576835 677 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 MIR4422-201ENST00000581938 83 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 AC005771.1-201ENST00000585581 349 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCNA1P78396 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.64□□□□□ -2.15
CCNA1P78396 AL139286.2-201ENST00000606838 396 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 AC009159.2-201ENST00000617603 606 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 AC019226.2-201ENST00000625973 424 ntBASIC1.64□□□□□ -2.15
CCNA1P78396 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCNA1P78396 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCNA1P78396 SNORA20.2-201ENST00000383922 131 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 RNU6-1179P-201ENST00000384667 107 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 MIR578-201ENST00000384828 96 ntBASIC1.63□□□□□ -2.15
CCNA1P78396 Y_RNA.597-201ENST00000410463 100 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms