Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 Y_RNA.530-201ENST00000384587 101 ntBASIC2.54□□□□□ -2
PRAMEP78395 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.54□□□□□ -2
PRAMEP78395 VN1R36P-201ENST00000414936 291 ntBASIC2.54□□□□□ -2
PRAMEP78395 AL139415.2-201ENST00000431968 163 ntBASIC2.54□□□□□ -2
PRAMEP78395 SNAP23P1-201ENST00000433229 246 ntBASIC2.54□□□□□ -2
PRAMEP78395 AL161788.1-201ENST00000441805 169 ntBASIC2.54□□□□□ -2
PRAMEP78395 AL353752.1-201ENST00000454946 260 ntBASIC2.54□□□□□ -2
PRAMEP78395 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.54□□□□□ -2
PRAMEP78395 snoU13.14-201ENST00000459372 104 ntBASIC2.54□□□□□ -2
PRAMEP78395 RPL9P9-202ENST00000466501 579 ntBASIC2.54□□□□□ -2
PRAMEP78395 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.54□□□□□ -2
PRAMEP78395 RPL30P1-201ENST00000488676 339 ntBASIC2.54□□□□□ -2
PRAMEP78395 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.54□□□□□ -2
PRAMEP78395 RNU6-273P-201ENST00000516937 96 ntBASIC2.54□□□□□ -2
PRAMEP78395 HSPE1P4-201ENST00000550617 308 ntBASIC2.54□□□□□ -2
PRAMEP78395 AC026371.1-201ENST00000551867 419 ntBASIC2.54□□□□□ -2
PRAMEP78395 TRAV32-201ENST00000553993 340 ntBASIC2.54□□□□□ -2
PRAMEP78395 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.54□□□□□ -2
PRAMEP78395 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
PRAMEP78395 VN1R107P-201ENST00000601784 209 ntBASIC2.54□□□□□ -2
PRAMEP78395 AL670379.2-201ENST00000604983 252 ntBASIC2.54□□□□□ -2
PRAMEP78395 AC068944.2-201ENST00000610373 403 ntBASIC2.54□□□□□ -2
PRAMEP78395 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRAMEP78395 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
PRAMEP78395 MTND4P23-201ENST00000447723 1363 ntBASIC2.53□□□□□ -2
PRAMEP78395 ZNF271P-202ENST00000465539 1970 ntBASIC2.53□□□□□ -2
PRAMEP78395 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
PRAMEP78395 RNU6-1317P-201ENST00000364582 104 ntBASIC2.53□□□□□ -2
PRAMEP78395 MIR196B-201ENST00000384852 84 ntBASIC2.53□□□□□ -2
PRAMEP78395 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRAMEP78395 CBX3P9-201ENST00000402326 552 ntBASIC2.53□□□□□ -2
PRAMEP78395 RNU6-1148P-201ENST00000410992 104 ntBASIC2.53□□□□□ -2
PRAMEP78395 AC007064.1-201ENST00000412238 351 ntBASIC2.53□□□□□ -2
PRAMEP78395 AL513185.2-201ENST00000425543 193 ntBASIC2.53□□□□□ -2
PRAMEP78395 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.53□□□□□ -2
PRAMEP78395 CYP2C59P-201ENST00000457790 269 ntBASIC2.53□□□□□ -2
PRAMEP78395 RNU7-66P-201ENST00000459469 62 ntBASIC2.53□□□□□ -2
PRAMEP78395 RPS27P27-201ENST00000498779 255 ntBASIC2.53□□□□□ -2
PRAMEP78395 AC091874.1-201ENST00000511402 339 ntBASIC2.53□□□□□ -2
PRAMEP78395 RNU6-1314P-201ENST00000517139 104 ntBASIC2.53□□□□□ -2
PRAMEP78395 RNU6-586P-201ENST00000517265 104 ntBASIC2.53□□□□□ -2
PRAMEP78395 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.53□□□□□ -2
PRAMEP78395 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.53□□□□□ -2
PRAMEP78395 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.53□□□□□ -2
PRAMEP78395 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.53□□□□□ -2
PRAMEP78395 AP001836.1-201ENST00000604675 523 ntBASIC2.53□□□□□ -2
PRAMEP78395 AL033523.1-201ENST00000605153 153 ntBASIC2.53□□□□□ -2
PRAMEP78395 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRAMEP78395 AC104237.2-201ENST00000612456 443 ntBASIC2.53□□□□□ -2
PRAMEP78395 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.53□□□□□ -2
PRAMEP78395 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
PRAMEP78395 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PRAMEP78395 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
PRAMEP78395 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRAMEP78395 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRAMEP78395 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PRAMEP78395 Y_RNA.86-201ENST00000363020 111 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 Y_RNA.100-201ENST00000363141 102 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 RNU6-1285P-201ENST00000363480 105 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 SNORA80A-201ENST00000363922 136 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRAMEP78395 Y_RNA.414-201ENST00000384011 101 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 RNA5SP118-201ENST00000410385 109 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 AC009161.1-201ENST00000417306 376 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 MTND3P9-201ENST00000429526 346 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 MTATP6P13-201ENST00000438531 667 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 MTCO3P18-201ENST00000440206 761 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.52□□□□□ -2.01
PRAMEP78395 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.52□□□□□ -2.01
PRAMEP78395 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.52□□□□□ -2.01
PRAMEP78395 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
PRAMEP78395 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.52□□□□□ -2.01
PRAMEP78395 RNU5F-2P-201ENST00000516066 82 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 RNU6-612P-201ENST00000516909 102 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 RNU1-104P-201ENST00000517280 175 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 MIR4319-201ENST00000577285 85 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 AL160281.1-201ENST00000605307 311 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 AC063943.3-201ENST00000615562 356 ntBASIC2.52□□□□□ -2.01
PRAMEP78395 Y_RNA.157-201ENST00000363638 102 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 RNU6-1141P-201ENST00000364520 107 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 SNORD32A-201ENST00000364805 84 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 RNA5SP240-201ENST00000365355 128 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 AL591034.2-201ENST00000402839 359 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 RNA5SP184-201ENST00000411071 108 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 ZNF885P-201ENST00000420174 1098 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.51□□□□□ -2.01
PRAMEP78395 AL590632.1-201ENST00000424289 371 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 UBE2V1P4-201ENST00000425374 344 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 AC244670.1-201ENST00000436879 112 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.51□□□□□ -2.01
PRAMEP78395 AC025465.4-201ENST00000513422 638 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 RNA5SP356-201ENST00000515972 94 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 RNU6-256P-201ENST00000516747 97 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 IMMP1LP2-201ENST00000552954 492 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.51□□□□□ -2.01
PRAMEP78395 SNORA59B-202ENST00000578183 701 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 MIR3672-201ENST00000584290 82 ntBASIC2.51□□□□□ -2.01
PRAMEP78395 MIR3942-201ENST00000585264 109 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms