Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
USP46P62068 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP46P62068 USP8P1-201ENST00000494673 3183 ntBASIC4.77□□□□□ -1.65
USP46P62068 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.77□□□□□ -1.65
USP46P62068 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.77□□□□□ -1.65
USP46P62068 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP46P62068 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP46P62068 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
USP46P62068 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
USP46P62068 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP46P62068 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.76□□□□□ -1.65
USP46P62068 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP46P62068 RNU1-75P-201ENST00000347264 129 ntBASIC4.76□□□□□ -1.65
USP46P62068 RNU4-15P-201ENST00000362613 141 ntBASIC4.76□□□□□ -1.65
USP46P62068 RNU1-83P-201ENST00000363426 164 ntBASIC4.76□□□□□ -1.65
USP46P62068 Y_RNA.294-201ENST00000364916 102 ntBASIC4.76□□□□□ -1.65
USP46P62068 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.76□□□□□ -1.65
USP46P62068 AL139281.1-201ENST00000422120 335 ntBASIC4.76□□□□□ -1.65
USP46P62068 RPS12P10-201ENST00000427031 377 ntBASIC4.76□□□□□ -1.65
USP46P62068 AL714022.1-201ENST00000439897 151 ntBASIC4.76□□□□□ -1.65
USP46P62068 AC117454.1-201ENST00000491120 168 ntBASIC4.76□□□□□ -1.65
USP46P62068 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.76□□□□□ -1.65
USP46P62068 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.76□□□□□ -1.65
USP46P62068 AC125257.1-201ENST00000560400 2930 ntBASIC4.76□□□□□ -1.65
USP46P62068 MIR3613-201ENST00000579844 87 ntBASIC4.76□□□□□ -1.65
USP46P62068 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.76□□□□□ -1.65
USP46P62068 AC006133.1-201ENST00000617106 264 ntBASIC4.76□□□□□ -1.65
USP46P62068 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.76□□□□□ -1.65
USP46P62068 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.76□□□□□ -1.65
USP46P62068 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP46P62068 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USP46P62068 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.76□□□□□ -1.65
USP46P62068 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USP46P62068 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.75□□□□□ -1.65
USP46P62068 MTND5P32-201ENST00000560711 1802 ntBASIC4.75□□□□□ -1.65
USP46P62068 Y_RNA.251-201ENST00000364551 99 ntBASIC4.75□□□□□ -1.65
USP46P62068 U8.7-201ENST00000364940 136 ntBASIC4.75□□□□□ -1.65
USP46P62068 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
USP46P62068 Y_RNA.622-201ENST00000411091 108 ntBASIC4.75□□□□□ -1.65
USP46P62068 AL356387.2-201ENST00000422272 243 ntBASIC4.75□□□□□ -1.65
USP46P62068 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.75□□□□□ -1.65
USP46P62068 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.75□□□□□ -1.65
USP46P62068 Y_RNA.712-201ENST00000517011 92 ntBASIC4.75□□□□□ -1.65
USP46P62068 MIR4697-201ENST00000582977 78 ntBASIC4.75□□□□□ -1.65
USP46P62068 AC023043.3-201ENST00000593113 385 ntBASIC4.75□□□□□ -1.65
USP46P62068 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.75□□□□□ -1.65
USP46P62068 AC069200.1-201ENST00000609511 323 ntBASIC4.75□□□□□ -1.65
USP46P62068 AC099778.2-201ENST00000610904 211 ntBASIC4.75□□□□□ -1.65
USP46P62068 AC011944.2-201ENST00000624440 683 ntBASIC4.75□□□□□ -1.65
USP46P62068 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.75□□□□□ -1.65
USP46P62068 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.75□□□□□ -1.65
USP46P62068 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.75□□□□□ -1.65
USP46P62068 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.75□□□□□ -1.65
USP46P62068 CPHL1P-201ENST00000461341 3407 ntBASIC4.75□□□□□ -1.65
USP46P62068 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP46P62068 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP46P62068 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.74□□□□□ -1.65
USP46P62068 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
USP46P62068 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP46P62068 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.74□□□□□ -1.65
USP46P62068 U3.8-201ENST00000363675 217 ntBASIC4.74□□□□□ -1.65
USP46P62068 U8.12-201ENST00000384701 133 ntBASIC4.74□□□□□ -1.65
USP46P62068 SDHCP2-201ENST00000398565 501 ntBASIC4.74□□□□□ -1.65
USP46P62068 AL512604.1-201ENST00000404812 257 ntBASIC4.74□□□□□ -1.65
USP46P62068 HMGN2P20-201ENST00000437531 273 ntBASIC4.74□□□□□ -1.65
USP46P62068 NDUFS5P3-201ENST00000450668 321 ntBASIC4.74□□□□□ -1.65
USP46P62068 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.74□□□□□ -1.65
USP46P62068 AL441985.1-201ENST00000457727 251 ntBASIC4.74□□□□□ -1.65
USP46P62068 RNA5SP310-201ENST00000459084 116 ntBASIC4.74□□□□□ -1.65
USP46P62068 SRIP1-201ENST00000489235 288 ntBASIC4.74□□□□□ -1.65
USP46P62068 HSPE1P18-201ENST00000517602 280 ntBASIC4.74□□□□□ -1.65
USP46P62068 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.74□□□□□ -1.65
USP46P62068 AC015813.4-201ENST00000610469 179 ntBASIC4.74□□□□□ -1.65
USP46P62068 FAM27D1-201ENST00000612308 341 ntBASIC4.74□□□□□ -1.65
USP46P62068 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.74□□□□□ -1.65
USP46P62068 AC068647.2-201ENST00000637380 353 ntBASIC4.74□□□□□ -1.65
USP46P62068 MIR4679-1-201ENST00000637619 75 ntBASIC4.74□□□□□ -1.65
USP46P62068 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USP46P62068 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP46P62068 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.74□□□□□ -1.65
USP46P62068 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
USP46P62068 AC007656.2-201ENST00000624902 4547 ntBASIC4.73□□□□□ -1.65
USP46P62068 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
USP46P62068 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP46P62068 AC139713.2-215ENST00000641428 5037 ntBASIC4.73□□□□□ -1.65
USP46P62068 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.73□□□□□ -1.65
USP46P62068 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP46P62068 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
USP46P62068 RNA5SP509-201ENST00000364577 119 ntBASIC4.73□□□□□ -1.65
USP46P62068 Y_RNA.584-201ENST00000391090 114 ntBASIC4.73□□□□□ -1.65
USP46P62068 HDGFP1-201ENST00000405943 252 ntBASIC4.73□□□□□ -1.65
USP46P62068 AL158823.1-201ENST00000418441 478 ntBASIC4.73□□□□□ -1.65
USP46P62068 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.73□□□□□ -1.65
USP46P62068 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.73□□□□□ -1.65
USP46P62068 RN7SL385P-201ENST00000468873 276 ntBASIC4.73□□□□□ -1.65
USP46P62068 RN7SL817P-201ENST00000480777 288 ntBASIC4.73□□□□□ -1.65
USP46P62068 AC105137.1-201ENST00000484355 562 ntBASIC4.73□□□□□ -1.65
USP46P62068 Y_RNA.757-201ENST00000578934 114 ntBASIC4.73□□□□□ -1.65
USP46P62068 AL137843.1-201ENST00000605078 385 ntBASIC4.73□□□□□ -1.65
USP46P62068 AC012640.5-201ENST00000623897 319 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms