Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 SNORA40C-201ENST00000391285 128 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 RNU6-1068P-201ENST00000410958 103 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AL109913.1-201ENST00000421173 514 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AC083798.1-201ENST00000472671 131 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 MTCO3P9-201ENST00000506989 781 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 SNORA40.12-201ENST00000516329 111 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 RN7SKP219-201ENST00000516825 296 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.16□□□□□ -2.06
RIPK4P57078 AC024614.2-201ENST00000577584 372 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 AC008521.1-201ENST00000587471 187 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.16□□□□□ -2.06
RIPK4P57078 AC008536.2-201ENST00000607284 349 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 AC130324.3-201ENST00000614165 542 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 AC002553.4-201ENST00000616896 331 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 AC005609.4-201ENST00000625071 447 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.16□□□□□ -2.06
RIPK4P57078 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.16□□□□□ -2.06
RIPK4P57078 MIR7157-201ENST00000635801 60 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 AC024614.3-201ENST00000637860 256 ntBASIC2.16□□□□□ -2.06
RIPK4P57078 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.16□□□□□ -2.06
RIPK4P57078 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.16□□□□□ -2.06
RIPK4P57078 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RIPK4P57078 MTND5P30-201ENST00000452896 1731 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AC073343.1-201ENST00000328239 651 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 RNA5SP432-201ENST00000362480 116 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 Y_RNA.295-201ENST00000364918 102 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 RNU4-48P-201ENST00000365559 182 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RIPK4P57078 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.15□□□□□ -2.07
RIPK4P57078 RNU6-1029P-201ENST00000384109 107 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 RNY3P14-201ENST00000384309 102 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 RNU6-903P-201ENST00000391270 109 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 MIR1277-201ENST00000408536 78 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.15□□□□□ -2.07
RIPK4P57078 RPL30P16-201ENST00000419341 429 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.15□□□□□ -2.07
RIPK4P57078 AC000111.3-201ENST00000433478 193 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.15□□□□□ -2.07
RIPK4P57078 AC073415.1-201ENST00000449240 153 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.15□□□□□ -2.07
RIPK4P57078 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.15□□□□□ -2.07
RIPK4P57078 AC117522.1-201ENST00000509821 380 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AC108078.2-201ENST00000510750 236 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.15□□□□□ -2.07
RIPK4P57078 RNU6-1281P-201ENST00000516223 105 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 Y_RNA.689-201ENST00000516589 107 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.15□□□□□ -2.07
RIPK4P57078 OR5AL2P-201ENST00000532185 920 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.15□□□□□ -2.07
RIPK4P57078 AL157687.1-201ENST00000554853 619 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AL121821.2-201ENST00000556081 394 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.15□□□□□ -2.07
RIPK4P57078 AC023824.2-201ENST00000566185 400 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 MIR1273C-201ENST00000578669 77 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RIPK4P57078 AC008749.1-201ENST00000597650 306 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 RBM11P1-201ENST00000604951 799 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AC008945.2-201ENST00000606056 604 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 RMST_3.1-201ENST00000611651 109 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AL512643.1-201ENST00000635735 524 ntBASIC2.15□□□□□ -2.07
RIPK4P57078 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.15□□□□□ -2.07
RIPK4P57078 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RIPK4P57078 AC006026.1-201ENST00000444025 1803 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RIPK4P57078 RNU6-451P-201ENST00000362921 107 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 RNU6-1322P-201ENST00000364309 107 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 SNORA4.3-201ENST00000365564 137 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 MIR17-201ENST00000385012 84 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 MIR518D-201ENST00000385014 87 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 RNU6-220P-201ENST00000390919 107 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.14□□□□□ -2.07
RIPK4P57078 AC007560.1-201ENST00000426912 237 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.14□□□□□ -2.07
RIPK4P57078 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.14□□□□□ -2.07
RIPK4P57078 HMGB1P31-201ENST00000437242 427 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.14□□□□□ -2.07
RIPK4P57078 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.14□□□□□ -2.07
RIPK4P57078 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.14□□□□□ -2.07
RIPK4P57078 AL356010.1-201ENST00000456364 102 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 AC080013.2-201ENST00000460866 323 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.14□□□□□ -2.07
RIPK4P57078 AC116353.2-201ENST00000505332 712 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.14□□□□□ -2.07
RIPK4P57078 SCARNA3-201ENST00000517097 143 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.14□□□□□ -2.07
RIPK4P57078 HIF1AP1-201ENST00000553642 175 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 AL157871.3-201ENST00000557231 293 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 MIR5583-1-201ENST00000580941 59 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.14□□□□□ -2.07
RIPK4P57078 MIR15A-201ENST00000607334 83 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms