Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH12P55289 AL353997.1-201ENST00000432936 108 ntBASIC2.69□□□□□ -1.98
CDH12P55289 RPL23AP50-201ENST00000434149 455 ntBASIC2.69□□□□□ -1.98
CDH12P55289 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH12P55289 AC124916.1-201ENST00000444020 547 ntBASIC2.69□□□□□ -1.98
CDH12P55289 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH12P55289 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.69□□□□□ -1.98
CDH12P55289 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH12P55289 AC006445.1-201ENST00000491925 405 ntBASIC2.69□□□□□ -1.98
CDH12P55289 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
CDH12P55289 SNRPGP18-201ENST00000553000 214 ntBASIC2.69□□□□□ -1.98
CDH12P55289 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH12P55289 MIR5696-201ENST00000578474 85 ntBASIC2.69□□□□□ -1.98
CDH12P55289 AC022432.1-201ENST00000595739 310 ntBASIC2.69□□□□□ -1.98
CDH12P55289 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.69□□□□□ -1.98
CDH12P55289 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH12P55289 AC009318.2-201ENST00000610917 651 ntBASIC2.69□□□□□ -1.98
CDH12P55289 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH12P55289 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH12P55289 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH12P55289 AC110079.1-202ENST00000635213 138 ntBASIC2.69□□□□□ -1.98
CDH12P55289 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.69□□□□□ -1.98
CDH12P55289 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH12P55289 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
CDH12P55289 Y_RNA.112-201ENST00000363250 102 ntBASIC2.68□□□□□ -1.98
CDH12P55289 SNORA63-201ENST00000363450 132 ntBASIC2.68□□□□□ -1.98
CDH12P55289 RNU1-105P-201ENST00000363470 161 ntBASIC2.68□□□□□ -1.98
CDH12P55289 RNU6-799P-201ENST00000363567 107 ntBASIC2.68□□□□□ -1.98
CDH12P55289 SNORA71.1-201ENST00000364523 117 ntBASIC2.68□□□□□ -1.98
CDH12P55289 RNU6-487P-201ENST00000365430 104 ntBASIC2.68□□□□□ -1.98
CDH12P55289 RNU6-748P-201ENST00000384648 107 ntBASIC2.68□□□□□ -1.98
CDH12P55289 MIR544A-201ENST00000384855 91 ntBASIC2.68□□□□□ -1.98
CDH12P55289 MIR512-1-201ENST00000384913 84 ntBASIC2.68□□□□□ -1.98
CDH12P55289 BTF3L4P2-201ENST00000392798 346 ntBASIC2.68□□□□□ -1.98
CDH12P55289 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH12P55289 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH12P55289 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH12P55289 NUP35P1-201ENST00000422734 947 ntBASIC2.68□□□□□ -1.98
CDH12P55289 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH12P55289 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH12P55289 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH12P55289 RPL21P129-201ENST00000491732 478 ntBASIC2.68□□□□□ -1.98
CDH12P55289 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH12P55289 SMURF2P1-201ENST00000514992 481 ntBASIC2.68□□□□□ -1.98
CDH12P55289 RNU6-976P-201ENST00000516086 111 ntBASIC2.68□□□□□ -1.98
CDH12P55289 SCARNA15.1-201ENST00000516384 125 ntBASIC2.68□□□□□ -1.98
CDH12P55289 RNU6-307P-201ENST00000516743 106 ntBASIC2.68□□□□□ -1.98
CDH12P55289 Y_RNA.711-201ENST00000516993 102 ntBASIC2.68□□□□□ -1.98
CDH12P55289 RNU6-699P-201ENST00000517081 110 ntBASIC2.68□□□□□ -1.98
CDH12P55289 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.68□□□□□ -1.98
CDH12P55289 CKS1BP7-201ENST00000522230 235 ntBASIC2.68□□□□□ -1.98
CDH12P55289 AC090897.2-201ENST00000581715 130 ntBASIC2.68□□□□□ -1.98
CDH12P55289 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
CDH12P55289 AL137843.1-201ENST00000605078 385 ntBASIC2.68□□□□□ -1.98
CDH12P55289 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
CDH12P55289 AC091953.5-201ENST00000622919 233 ntBASIC2.68□□□□□ -1.98
CDH12P55289 MIR6733-201ENST00000635723 61 ntBASIC2.68□□□□□ -1.98
CDH12P55289 MTND5P1-201ENST00000445440 1375 ntBASIC2.68□□□□□ -1.98
CDH12P55289 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDH12P55289 MTND5P9-201ENST00000503854 1755 ntBASIC2.68□□□□□ -1.98
CDH12P55289 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH12P55289 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CDH12P55289 AC009541.1-201ENST00000438279 2662 ntBASIC2.67□□□□□ -1.98
CDH12P55289 AC008669.1-201ENST00000565823 2178 ntBASIC2.67□□□□□ -1.98
CDH12P55289 MAPK10-266ENST00000641066 6555 ntBASIC2.67□□□□□ -1.98
CDH12P55289 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDH12P55289 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH12P55289 RNU6-490P-201ENST00000362985 107 ntBASIC2.67□□□□□ -1.98
CDH12P55289 Y_RNA.496-201ENST00000384444 101 ntBASIC2.67□□□□□ -1.98
CDH12P55289 MIR34B-201ENST00000385076 84 ntBASIC2.67□□□□□ -1.98
CDH12P55289 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH12P55289 AC018865.2-201ENST00000423631 129 ntBASIC2.67□□□□□ -1.98
CDH12P55289 RPL23AP95-201ENST00000426806 265 ntBASIC2.67□□□□□ -1.98
CDH12P55289 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH12P55289 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH12P55289 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH12P55289 AC107626.1-201ENST00000471084 183 ntBASIC2.67□□□□□ -1.98
CDH12P55289 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH12P55289 AC068781.1-201ENST00000488231 618 ntBASIC2.67□□□□□ -1.98
CDH12P55289 AC096576.1-201ENST00000489014 359 ntBASIC2.67□□□□□ -1.98
CDH12P55289 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH12P55289 RNU5B-3P-201ENST00000516601 115 ntBASIC2.67□□□□□ -1.98
CDH12P55289 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
CDH12P55289 AL442663.2-201ENST00000554385 511 ntBASIC2.67□□□□□ -1.98
CDH12P55289 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH12P55289 AL355877.2-201ENST00000603670 358 ntBASIC2.67□□□□□ -1.98
CDH12P55289 YPEL5P2-201ENST00000605553 359 ntBASIC2.67□□□□□ -1.98
CDH12P55289 Y_RNA.812-201ENST00000610788 101 ntBASIC2.67□□□□□ -1.98
CDH12P55289 Y_RNA.784-201ENST00000613803 101 ntBASIC2.67□□□□□ -1.98
CDH12P55289 Y_RNA.787-201ENST00000616522 101 ntBASIC2.67□□□□□ -1.98
CDH12P55289 Y_RNA.780-201ENST00000617336 101 ntBASIC2.67□□□□□ -1.98
CDH12P55289 Y_RNA.801-201ENST00000619005 101 ntBASIC2.67□□□□□ -1.98
CDH12P55289 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDH12P55289 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH12P55289 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
CDH12P55289 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH12P55289 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH12P55289 ZNF299P-201ENST00000406845 1804 ntBASIC2.66□□□□□ -1.98
CDH12P55289 AC091564.4-201ENST00000533934 2194 ntBASIC2.66□□□□□ -1.98
CDH12P55289 MTND4P27-201ENST00000450813 1354 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms